Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RWI entry

There are 5 chains in PDB entry 9RWI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
P
 ILE 2LEU 9
A
 SER 26GLN 300
B
 ILE 21MET 119
H
 GLN 1SER 212
L
 ALA 1ASP 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9RWI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 109Right-handed alpha
Helix 2
AA2
A
171 174Right-handed 310
Helix 3
AA3
A
175 186Right-handed alpha
Helix 4
AA4
A
186 199Right-handed alpha
Helix 5
AA5
A
199 204Right-handed alpha
Helix 6
AA6
A
277 279Right-handed 310
Helix 7
AA7
H
72 75Right-handed 310
Helix 8
AA8
H
199 202Right-handed 310
Helix 9
AA9
L
79 83Right-handed 310
Helix 10
AB1
L
126 131Right-handed alpha
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There are 17 sheets in PDB entry 9RWI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 71first strand
Strand 2
A
55 61anti-parallel
Strand 3
A
45 52anti-parallel
Strand 4
A
27 36anti-parallel
Strand 5
A
118 127anti-parallel
Strand 6
A
133 142anti-parallel
Strand 7
A
146 150anti-parallel
Strand 8
A
157 159anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 217first strand
Strand 2
A
222 227anti-parallel
Strand 3
A
269 274anti-parallel
Strand 4
A
252 254anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 243first strand
Strand 2
A
281 287anti-parallel
Strand 3
A
294 296anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
265 266anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 31first strand
Strand 2
B
42 50anti-parallel
Strand 3
B
82 89anti-parallel
Strand 4
B
75 76anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 61first strand
Strand 2
B
98 103anti-parallel
Strand 3
B
112 113anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 6first strand
Strand 2
H
20 24anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
9 11first strand
Strand 2
H
108 112parallel
Strand 3
H
88 94anti-parallel
Strand 4
H
33 38anti-parallel
Strand 5
H
44 50anti-parallel
Strand 6
H
56 58anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
69 71first strand
Strand 2
H
76 78anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
121 125first strand
Strand 2
H
138 146anti-parallel
Strand 3
H
177 184anti-parallel
Strand 4
H
164 166anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
121 125first strand
Strand 2
H
138 146anti-parallel
Strand 3
H
177 184anti-parallel
Strand 4
H
170 171anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
152 155first strand
Strand 2
H
192 198anti-parallel
Strand 3
H
203 209anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
21 25anti-parallel
Strand 3
L
70 74anti-parallel
Strand 4
L
63 66anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 14first strand
Strand 2
L
106 110parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
53 54first strand
Strand 2
L
45 49anti-parallel
Strand 3
L
33 38anti-parallel
Strand 4
L
85 90anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
118 121first strand
Strand 2
L
132 142anti-parallel
Strand 3
L
175 184anti-parallel
Strand 4
L
161 165anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
155 156first strand
Strand 2
L
147 152anti-parallel
Strand 3
L
194 200anti-parallel
Strand 4
L
203 209anti-parallel
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