Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RWM entry

There are 3 chains in PDB entry 9RWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 706THR 856
B
SER 696ASN 860
C
ASN 695LYS 853
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 9RWM


There are 5 sheets in PDB entry 9RWM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
797 801first strand
Strand 2
B
804 808anti-parallel
Strand 3
B
817 820anti-parallel
Strand 4
B
756 762anti-parallel
Strand 5
B
845 852anti-parallel
Strand 6
B
731 738anti-parallel
Strand 7
A
797 801parallel
Strand 8
A
804 808anti-parallel
Strand 9
A
817 820anti-parallel
Strand 10
A
756 762anti-parallel
Strand 11
A
845 852anti-parallel
Strand 12
A
731 738anti-parallel
Strand 13
C
797 801parallel
Strand 14
C
804 808anti-parallel
Strand 15
C
817 820anti-parallel
Strand 16
C
756 762anti-parallel
Strand 17
C
845 852anti-parallel
Strand 18
C
731 738anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
744 751first strand
Strand 2
A
830 836anti-parallel
Strand 3
A
773 779anti-parallel
Strand 4
A
784 786anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
697 699first strand
Strand 2
B
702 704anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
744 751first strand
Strand 2
B
830 836anti-parallel
Strand 3
B
773 779anti-parallel
Strand 4
B
784 786anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
744 751first strand
Strand 2
C
830 836anti-parallel
Strand 3
C
773 779anti-parallel
Strand 4
C
784 786anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il