Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RWO entry

There is 1 chain in PDB entry 9RWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2GLY 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9RWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
16 31Right-handed alpha
Helix 3
AA3
A
42 75Right-handed alpha
Helix 4
AA4
A
79 83Right-handed 310
Helix 5
AA5
A
106 136Right-handed alpha
Helix 6
AA6
A
140 146Right-handed alpha
Helix 7
AA7
A
218 225Right-handed alpha
Helix 8
AA8
A
262 267Right-handed 310
Helix 9
AA9
A
278 289Right-handed alpha
Helix 10
AB1
A
292 304Right-handed alpha
Helix 11
AB2
A
305 307Right-handed 310
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There are 3 sheets in PDB entry 9RWO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
33 37parallel
Strand 3
A
213 217anti-parallel
Strand 4
A
183 188anti-parallel
Strand 5
A
244 252anti-parallel
Strand 6
A
154 162anti-parallel
Strand 7
A
87 94anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
234 236anti-parallel
Strand 3
A
195 199anti-parallel
Strand 4
A
202 205anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
276 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il