Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9RWT entry

There is 1 chain in PDB entry 9RWT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 22LEU 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 9RWT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
23 43Right-handed alpha
Helix 2
AA2
A
47 69Right-handed alpha
Helix 3
AA3
A
87 97Right-handed alpha
Helix 4
AA4
A
101 115Right-handed alpha
Helix 5
AA5
A
116 120Right-handed 310
Helix 6
AA6
A
121 136Right-handed alpha
Helix 7
AA7
A
136 144Right-handed alpha
Helix 8
AA8
A
150 158Right-handed alpha
Helix 9
AA9
A
158 165Right-handed alpha
Helix 10
AB1
A
165 193Right-handed alpha
Helix 11
AB2
A
195 213Right-handed alpha
Helix 12
AB3
A
220 246Right-handed alpha
Helix 13
AB4
A
247 259Right-handed alpha
Helix 14
AB5
A
270 274Right-handed 310
Helix 15
AB6
A
279 295Right-handed alpha
Helix 16
AB7
A
298 306Right-handed alpha
Helix 17
AB8
A
310 341Right-handed alpha
Helix 18
AB9
A
343 348Right-handed 310
Helix 19
AC1
A
354 356Right-handed 310
Helix 20
AC2
A
357 366Right-handed alpha
Helix 21
AC3
A
368 402Right-handed alpha
Helix 22
AC4
A
412 415Right-handed 310
Helix 23
AC5
A
416 438Right-handed alpha
Helix 24
AC6
A
440 455Right-handed alpha
Helix 25
AC7
A
455 465Right-handed alpha
Helix 26
AC8
A
470 489Right-handed alpha
Helix 27
AC9
A
490 494Right-handed 310
Helix 28
AD1
A
512 532Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9RWT.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
504 505first strand
Strand 2
A
508 509anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il