Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RWY entry

There are 3 chains in PDB entry 9RWY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	SER 507
B	SER 1	SER 507
D	TYR 4	ASP 227

There are176 helices in PDB entry 9RWY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	19	Right-handed alpha
Helix 2	AA2	A	20	21	Right-handed 310
Helix 3	AA3	A	22	26	Right-handed 310
Helix 4	AA4	A	55	66	Right-handed alpha
Helix 5	AA5	A	91	97	Right-handed alpha
Helix 6	AA6	A	99	103	Right-handed 310
Helix 7	AA7	A	158	160	Right-handed 310
Helix 8	AA8	A	161	170	Right-handed alpha
Helix 9	AA9	A	179	190	Right-handed alpha
Helix 10	AB1	A	193	202	Right-handed alpha
Helix 11	AB2	A	203	206	Right-handed 310
Helix 12	AB3	A	247	258	Right-handed alpha
Helix 13	AB4	A	260	272	Right-handed alpha
Helix 14	AB5	A	286	293	Right-handed alpha
Helix 15	AB6	A	323	328	Right-handed alpha
Helix 16	AB7	A	347	365	Right-handed alpha
Helix 17	AB8	A	368	376	Right-handed 310
Helix 18	AB9	A	437	440	Right-handed 310
Helix 19	AC1	A	441	450	Right-handed alpha
Helix 20	AC2	A	453	469	Right-handed alpha
Helix 21	AC3	A	473	488	Right-handed alpha
Helix 22	AC4	A	488	506	Right-handed alpha
Helix 23	AC5	B	9	19	Right-handed alpha
Helix 24	AC6	B	20	21	Right-handed 310
Helix 25	AC7	B	22	26	Right-handed 310
Helix 26	AC8	B	55	66	Right-handed alpha
Helix 27	AC9	B	91	97	Right-handed alpha
Helix 28	AD1	B	99	103	Right-handed 310
Helix 29	AD2	B	158	160	Right-handed 310
Helix 30	AD3	B	161	170	Right-handed alpha
Helix 31	AD4	B	179	190	Right-handed alpha
Helix 32	AD5	B	193	202	Right-handed alpha
Helix 33	AD6	B	203	206	Right-handed 310
Helix 34	AD7	B	247	258	Right-handed alpha
Helix 35	AD8	B	260	272	Right-handed alpha
Helix 36	AD9	B	286	293	Right-handed alpha
Helix 37	AE1	B	323	328	Right-handed alpha
Helix 38	AE2	B	347	365	Right-handed alpha
Helix 39	AE3	B	368	376	Right-handed 310
Helix 40	AE4	B	437	440	Right-handed 310
Helix 41	AE5	B	441	450	Right-handed alpha
Helix 42	AE6	B	453	469	Right-handed alpha
Helix 43	AE7	B	473	488	Right-handed alpha
Helix 44	AE8	B	488	507	Right-handed alpha
Helix 45	AE9	D	9	19	Right-handed alpha
Helix 46	AF1	D	20	21	Right-handed 310
Helix 47	AF2	D	22	26	Right-handed 310
Helix 48	AF3	D	55	66	Right-handed alpha
Helix 49	AF4	D	91	97	Right-handed alpha
Helix 50	AF5	D	99	103	Right-handed 310
Helix 51	AF6	D	158	160	Right-handed 310
Helix 52	AF7	D	161	170	Right-handed alpha
Helix 53	AF8	D	179	190	Right-handed alpha
Helix 54	AF9	D	193	202	Right-handed alpha
Helix 55	AG1	D	203	206	Right-handed 310
Helix 56	AG2	D	247	258	Right-handed alpha
Helix 57	AG3	D	260	272	Right-handed alpha
Helix 58	AG4	D	286	293	Right-handed alpha
Helix 59	AG5	D	323	328	Right-handed alpha
Helix 60	AG6	D	347	365	Right-handed alpha
Helix 61	AG7	D	368	376	Right-handed 310
Helix 62	AG8	D	437	440	Right-handed 310
Helix 63	AG9	D	441	450	Right-handed alpha
Helix 64	AH1	D	453	469	Right-handed alpha
Helix 65	AH2	D	473	488	Right-handed alpha
Helix 66	AH3	D	488	508	Right-handed alpha
Helix 67	AH4	C	8	19	Right-handed alpha
Helix 68	AH5	C	20	21	Right-handed 310
Helix 69	AH6	C	22	26	Right-handed 310
Helix 70	AH7	C	55	66	Right-handed alpha
Helix 71	AH8	C	91	97	Right-handed alpha
Helix 72	AH9	C	99	103	Right-handed 310
Helix 73	AI1	C	158	160	Right-handed 310
Helix 74	AI2	C	161	170	Right-handed alpha
Helix 75	AI3	C	179	190	Right-handed alpha
Helix 76	AI4	C	193	202	Right-handed alpha
Helix 77	AI5	C	203	206	Right-handed 310
Helix 78	AI6	C	247	258	Right-handed alpha
Helix 79	AI7	C	260	272	Right-handed alpha
Helix 80	AI8	C	286	293	Right-handed alpha
Helix 81	AI9	C	323	328	Right-handed alpha
Helix 82	AJ1	C	347	365	Right-handed alpha
Helix 83	AJ2	C	368	376	Right-handed 310
Helix 84	AJ3	C	437	440	Right-handed 310
Helix 85	AJ4	C	441	450	Right-handed alpha
Helix 86	AJ5	C	453	469	Right-handed alpha
Helix 87	AJ6	C	473	488	Right-handed alpha
Helix 88	AJ7	C	488	508	Right-handed alpha
Helix 89	AJ8	E	9	19	Right-handed alpha
Helix 90	AJ9	E	20	21	Right-handed 310
Helix 91	AK1	E	22	26	Right-handed 310
Helix 92	AK2	E	55	66	Right-handed alpha
Helix 93	AK3	E	91	97	Right-handed alpha
Helix 94	AK4	E	99	103	Right-handed 310
Helix 95	AK5	E	158	160	Right-handed 310
Helix 96	AK6	E	161	170	Right-handed alpha
Helix 97	AK7	E	179	190	Right-handed alpha
Helix 98	AK8	E	193	202	Right-handed alpha
Helix 99	AK9	E	203	206	Right-handed 310
Helix 100	AL1	E	247	258	Right-handed alpha
Helix 101	AL2	E	260	272	Right-handed alpha
Helix 102	AL3	E	286	293	Right-handed alpha
Helix 103	AL4	E	323	328	Right-handed alpha
Helix 104	AL5	E	347	365	Right-handed alpha
Helix 105	AL6	E	368	376	Right-handed 310
Helix 106	AL7	E	437	440	Right-handed 310
Helix 107	AL8	E	441	450	Right-handed alpha
Helix 108	AL9	E	453	469	Right-handed alpha
Helix 109	AM1	E	473	488	Right-handed alpha
Helix 110	AM2	E	488	505	Right-handed alpha
Helix 111	AM3	F	9	19	Right-handed alpha
Helix 112	AM4	F	20	21	Right-handed 310
Helix 113	AM5	F	22	26	Right-handed 310
Helix 114	AM6	F	55	66	Right-handed alpha
Helix 115	AM7	F	91	97	Right-handed alpha
Helix 116	AM8	F	99	103	Right-handed 310
Helix 117	AM9	F	158	160	Right-handed 310
Helix 118	AN1	F	161	170	Right-handed alpha
Helix 119	AN2	F	179	190	Right-handed alpha
Helix 120	AN3	F	193	202	Right-handed alpha
Helix 121	AN4	F	203	206	Right-handed 310
Helix 122	AN5	F	247	258	Right-handed alpha
Helix 123	AN6	F	260	272	Right-handed alpha
Helix 124	AN7	F	286	293	Right-handed alpha
Helix 125	AN8	F	323	328	Right-handed alpha
Helix 126	AN9	F	347	365	Right-handed alpha
Helix 127	AO1	F	368	376	Right-handed 310
Helix 128	AO2	F	437	440	Right-handed 310
Helix 129	AO3	F	441	450	Right-handed alpha
Helix 130	AO4	F	453	469	Right-handed alpha
Helix 131	AO5	F	473	488	Right-handed alpha
Helix 132	AO6	F	488	505	Right-handed alpha
Helix 133	AO7	G	9	19	Right-handed alpha
Helix 134	AO8	G	20	21	Right-handed 310
Helix 135	AO9	G	22	26	Right-handed 310
Helix 136	AP1	G	55	66	Right-handed alpha
Helix 137	AP2	G	91	97	Right-handed alpha
Helix 138	AP3	G	99	103	Right-handed 310
Helix 139	AP4	G	158	160	Right-handed 310
Helix 140	AP5	G	161	170	Right-handed alpha
Helix 141	AP6	G	179	190	Right-handed alpha
Helix 142	AP7	G	193	202	Right-handed alpha
Helix 143	AP8	G	203	206	Right-handed 310
Helix 144	AP9	G	247	258	Right-handed alpha
Helix 145	AQ1	G	260	272	Right-handed alpha
Helix 146	AQ2	G	286	293	Right-handed alpha
Helix 147	AQ3	G	323	328	Right-handed alpha
Helix 148	AQ4	G	347	365	Right-handed alpha
Helix 149	AQ5	G	368	376	Right-handed 310
Helix 150	AQ6	G	437	440	Right-handed 310
Helix 151	AQ7	G	441	450	Right-handed alpha
Helix 152	AQ8	G	453	469	Right-handed alpha
Helix 153	AQ9	G	473	488	Right-handed alpha
Helix 154	AR1	G	488	500	Right-handed alpha
Helix 155	AR2	H	9	19	Right-handed alpha
Helix 156	AR3	H	20	21	Right-handed 310
Helix 157	AR4	H	22	26	Right-handed 310
Helix 158	AR5	H	55	66	Right-handed alpha
Helix 159	AR6	H	91	97	Right-handed alpha
Helix 160	AR7	H	99	103	Right-handed 310
Helix 161	AR8	H	158	160	Right-handed 310
Helix 162	AR9	H	161	170	Right-handed alpha
Helix 163	AS1	H	179	190	Right-handed alpha
Helix 164	AS2	H	193	202	Right-handed alpha
Helix 165	AS3	H	203	206	Right-handed 310
Helix 166	AS4	H	247	258	Right-handed alpha
Helix 167	AS5	H	260	272	Right-handed alpha
Helix 168	AS6	H	286	293	Right-handed alpha
Helix 169	AS7	H	323	328	Right-handed alpha
Helix 170	AS8	H	347	365	Right-handed alpha
Helix 171	AS9	H	368	376	Right-handed 310
Helix 172	AT1	H	437	440	Right-handed 310
Helix 173	AT2	H	441	450	Right-handed alpha
Helix 174	AT3	H	453	469	Right-handed alpha
Helix 175	AT4	H	473	488	Right-handed alpha
Helix 176	AT5	H	488	508	Right-handed alpha

There are 12 sheets in PDB entry 9RWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	45	first strand
Strand 2	C	423	431	anti-parallel
Strand 3	B	423	431	anti-parallel
Strand 4	D	42	45	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	344	first strand
Strand 2	A	221	224	anti-parallel
Strand 3	A	230	239	anti-parallel
Strand 4	A	277	285	anti-parallel
Strand 5	A	310	319	anti-parallel
Strand 6	A	79	88	anti-parallel
Strand 7	A	107	115	anti-parallel
Strand 8	A	132	139	anti-parallel
Strand 9	A	142	149	anti-parallel
Strand 10	A	215	216	anti-parallel
Strand 11	A	230	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	45	first strand
Strand 2	D	423	431	anti-parallel
Strand 3	A	423	431	anti-parallel
Strand 4	C	42	45	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	344	first strand
Strand 2	B	221	224	anti-parallel
Strand 3	B	230	239	anti-parallel
Strand 4	B	277	285	anti-parallel
Strand 5	B	310	319	anti-parallel
Strand 6	B	79	88	anti-parallel
Strand 7	B	107	115	anti-parallel
Strand 8	B	132	139	anti-parallel
Strand 9	B	142	149	anti-parallel
Strand 10	B	215	216	anti-parallel
Strand 11	B	230	239	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	342	344	first strand
Strand 2	D	221	224	anti-parallel
Strand 3	D	230	239	anti-parallel
Strand 4	D	277	285	anti-parallel
Strand 5	D	310	319	anti-parallel
Strand 6	D	79	88	anti-parallel
Strand 7	D	107	115	anti-parallel
Strand 8	D	132	139	anti-parallel
Strand 9	D	142	149	anti-parallel
Strand 10	D	215	216	anti-parallel
Strand 11	D	230	239	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	344	first strand
Strand 2	C	221	224	anti-parallel
Strand 3	C	230	239	anti-parallel
Strand 4	C	277	285	anti-parallel
Strand 5	C	310	319	anti-parallel
Strand 6	C	79	88	anti-parallel
Strand 7	C	107	115	anti-parallel
Strand 8	C	132	139	anti-parallel
Strand 9	C	142	149	anti-parallel
Strand 10	C	215	216	anti-parallel
Strand 11	C	230	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	45	first strand
Strand 2	G	423	431	anti-parallel
Strand 3	F	423	431	anti-parallel
Strand 4	H	42	45	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	342	344	first strand
Strand 2	E	221	224	anti-parallel
Strand 3	E	230	239	anti-parallel
Strand 4	E	277	285	anti-parallel
Strand 5	E	310	319	anti-parallel
Strand 6	E	79	88	anti-parallel
Strand 7	E	107	115	anti-parallel
Strand 8	E	132	139	anti-parallel
Strand 9	E	142	149	anti-parallel
Strand 10	E	215	216	anti-parallel
Strand 11	E	230	239	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	42	45	first strand
Strand 2	H	423	431	anti-parallel
Strand 3	E	423	431	anti-parallel
Strand 4	G	42	45	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	342	344	first strand
Strand 2	F	221	224	anti-parallel
Strand 3	F	230	239	anti-parallel
Strand 4	F	277	285	anti-parallel
Strand 5	F	310	319	anti-parallel
Strand 6	F	79	88	anti-parallel
Strand 7	F	107	115	anti-parallel
Strand 8	F	132	139	anti-parallel
Strand 9	F	142	149	anti-parallel
Strand 10	F	215	216	anti-parallel
Strand 11	F	230	239	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	342	344	first strand
Strand 2	G	221	224	anti-parallel
Strand 3	G	230	239	anti-parallel
Strand 4	G	277	285	anti-parallel
Strand 5	G	310	319	anti-parallel
Strand 6	G	79	88	anti-parallel
Strand 7	G	107	115	anti-parallel
Strand 8	G	132	139	anti-parallel
Strand 9	G	142	149	anti-parallel
Strand 10	G	215	216	anti-parallel
Strand 11	G	230	239	anti-parallel

Back to list of sheets
Back to top of page

There are 11 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	342	344	first strand
Strand 2	H	221	224	anti-parallel
Strand 3	H	230	239	anti-parallel
Strand 4	H	277	285	anti-parallel
Strand 5	H	310	319	anti-parallel
Strand 6	H	79	88	anti-parallel
Strand 7	H	106	115	anti-parallel
Strand 8	H	132	139	anti-parallel
Strand 9	H	142	149	anti-parallel
Strand 10	H	215	216	anti-parallel
Strand 11	H	230	239	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RWY

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWY