Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RWZ entry

There are 11 chains in PDB entry 9RWZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 22	ALA 859
B	MET 1	PRO 97
C	MET 1	PRO 97
D	GLY 13	CYS 112
E	PRO 14	CYS 112
G	U 1	U 24
H	MET 16	MET 189
I	LYS 15	MET 189
T	A 27	A 52
N	GLN 39	GLU 1823
M	GLY 71	PRO 1837

There are152 helices in PDB entry 9RWZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	67	82	Right-handed alpha
Helix 2	AA2	A	140	147	Right-handed alpha
Helix 3	AA3	A	156	167	Right-handed alpha
Helix 4	AA4	A	167	174	Right-handed alpha
Helix 5	AA5	A	229	238	Right-handed alpha
Helix 6	AA6	A	255	263	Right-handed alpha
Helix 7	AA7	A	308	315	Right-handed alpha
Helix 8	AA8	A	357	369	Right-handed alpha
Helix 9	AA9	A	371	386	Right-handed alpha
Helix 10	AB1	A	391	398	Right-handed alpha
Helix 11	AB2	A	463	480	Right-handed alpha
Helix 12	AB3	A	500	512	Right-handed alpha
Helix 13	AB4	A	527	538	Right-handed alpha
Helix 14	AB5	A	549	554	Right-handed alpha
Helix 15	AB6	A	556	572	Right-handed alpha
Helix 16	AB7	A	641	658	Right-handed alpha
Helix 17	AB8	A	672	674	Right-handed 310
Helix 18	AB9	A	675	693	Right-handed alpha
Helix 19	AC1	A	775	787	Right-handed alpha
Helix 20	AC2	A	800	817	Right-handed alpha
Helix 21	AC3	A	849	853	Right-handed 310
Helix 22	AC4	B	23	35	Right-handed alpha
Helix 23	AC5	B	38	42	Right-handed 310
Helix 24	AC6	C	23	35	Right-handed alpha
Helix 25	AC7	C	38	42	Right-handed 310
Helix 26	AC8	D	40	48	Right-handed alpha
Helix 27	AC9	D	52	57	Right-handed alpha
Helix 28	AD1	D	66	83	Right-handed alpha
Helix 29	AD2	D	99	111	Right-handed alpha
Helix 30	AD3	E	33	37	Right-handed alpha
Helix 31	AD4	E	39	46	Right-handed alpha
Helix 32	AD5	E	66	83	Right-handed alpha
Helix 33	AD6	E	96	98	Right-handed 310
Helix 34	AD7	E	99	110	Right-handed alpha
Helix 35	AD8	H	26	45	Right-handed alpha
Helix 36	AD9	H	53	67	Right-handed alpha
Helix 37	AE1	H	69	96	Right-handed alpha
Helix 38	AE2	H	101	123	Right-handed alpha
Helix 39	AE3	H	123	135	Right-handed alpha
Helix 40	AE4	H	138	151	Right-handed alpha
Helix 41	AE5	H	154	175	Right-handed alpha
Helix 42	AE6	H	180	187	Right-handed alpha
Helix 43	AE7	I	26	46	Right-handed alpha
Helix 44	AE8	I	53	67	Right-handed alpha
Helix 45	AE9	I	70	88	Right-handed alpha
Helix 46	AF1	I	88	96	Right-handed alpha
Helix 47	AF2	I	100	123	Right-handed alpha
Helix 48	AF3	I	123	135	Right-handed alpha
Helix 49	AF4	I	138	151	Right-handed alpha
Helix 50	AF5	I	157	174	Right-handed alpha
Helix 51	AF6	I	180	188	Right-handed alpha
Helix 52	AF7	N	75	88	Right-handed alpha
Helix 53	AF8	N	89	94	Right-handed alpha
Helix 54	AF9	N	101	111	Right-handed alpha
Helix 55	AG1	N	117	129	Right-handed alpha
Helix 56	AG2	N	131	143	Right-handed alpha
Helix 57	AG3	N	197	210	Right-handed alpha
Helix 58	AG4	N	219	225	Right-handed alpha
Helix 59	AG5	N	228	243	Right-handed alpha
Helix 60	AG6	N	244	246	Right-handed 310
Helix 61	AG7	N	247	260	Right-handed alpha
Helix 62	AG8	N	291	307	Right-handed alpha
Helix 63	AG9	N	315	324	Right-handed alpha
Helix 64	AH1	N	326	341	Right-handed alpha
Helix 65	AH2	N	344	360	Right-handed alpha
Helix 66	AH3	N	364	379	Right-handed alpha
Helix 67	AH4	N	379	391	Right-handed alpha
Helix 68	AH5	N	392	396	Right-handed 310
Helix 69	AH6	N	411	431	Right-handed alpha
Helix 70	AH7	N	437	461	Right-handed alpha
Helix 71	AH8	N	475	483	Right-handed alpha
Helix 72	AH9	N	485	490	Right-handed alpha
Helix 73	AI1	N	763	767	Right-handed 310
Helix 74	AI2	N	768	783	Right-handed alpha
Helix 75	AI3	N	785	802	Right-handed alpha
Helix 76	AI4	N	823	844	Right-handed alpha
Helix 77	AI5	N	850	863	Right-handed alpha
Helix 78	AI6	N	871	890	Right-handed alpha
Helix 79	AI7	N	895	911	Right-handed alpha
Helix 80	AI8	N	923	934	Right-handed alpha
Helix 81	AI9	N	952	965	Right-handed alpha
Helix 82	AJ1	N	978	997	Right-handed alpha
Helix 83	AJ2	N	1003	1012	Right-handed alpha
Helix 84	AJ3	N	1234	1253	Right-handed alpha
Helix 85	AJ4	N	1276	1296	Right-handed alpha
Helix 86	AJ5	N	1298	1302	Right-handed 310
Helix 87	AJ6	N	1308	1318	Right-handed alpha
Helix 88	AJ7	N	1320	1334	Right-handed alpha
Helix 89	AJ8	N	1335	1348	Right-handed alpha
Helix 90	AJ9	N	1353	1366	Right-handed alpha
Helix 91	AK1	N	1367	1369	Right-handed 310
Helix 92	AK2	N	1373	1386	Right-handed alpha
Helix 93	AK3	N	1389	1407	Right-handed alpha
Helix 94	AK4	N	1409	1429	Right-handed alpha
Helix 95	AK5	N	1663	1680	Right-handed alpha
Helix 96	AK6	N	1695	1711	Right-handed alpha
Helix 97	AK7	N	1714	1724	Right-handed alpha
Helix 98	AK8	N	1728	1743	Right-handed alpha
Helix 99	AK9	N	1755	1778	Right-handed alpha
Helix 100	AL1	N	1780	1798	Right-handed alpha
Helix 101	AL2	N	1801	1818	Right-handed alpha
Helix 102	AL3	M	75	87	Right-handed alpha
Helix 103	AL4	M	89	94	Right-handed alpha
Helix 104	AL5	M	101	111	Right-handed alpha
Helix 105	AL6	M	117	127	Right-handed alpha
Helix 106	AL7	M	131	143	Right-handed alpha
Helix 107	AL8	M	197	210	Right-handed alpha
Helix 108	AL9	M	219	225	Right-handed alpha
Helix 109	AM1	M	228	243	Right-handed alpha
Helix 110	AM2	M	247	259	Right-handed alpha
Helix 111	AM3	M	264	269	Right-handed alpha
Helix 112	AM4	M	294	307	Right-handed alpha
Helix 113	AM5	M	326	337	Right-handed alpha
Helix 114	AM6	M	344	360	Right-handed alpha
Helix 115	AM7	M	364	379	Right-handed alpha
Helix 116	AM8	M	379	390	Right-handed alpha
Helix 117	AM9	M	409	432	Right-handed alpha
Helix 118	AN1	M	437	463	Right-handed alpha
Helix 119	AN2	M	475	482	Right-handed alpha
Helix 120	AN3	M	768	783	Right-handed alpha
Helix 121	AN4	M	785	803	Right-handed alpha
Helix 122	AN5	M	823	845	Right-handed alpha
Helix 123	AN6	M	852	863	Right-handed alpha
Helix 124	AN7	M	871	889	Right-handed alpha
Helix 125	AN8	M	890	892	Right-handed 310
Helix 126	AN9	M	895	911	Right-handed alpha
Helix 127	AO1	M	922	934	Right-handed alpha
Helix 128	AO2	M	950	965	Right-handed alpha
Helix 129	AO3	M	975	997	Right-handed alpha
Helix 130	AO4	M	1003	1012	Right-handed alpha
Helix 131	AO5	M	1234	1252	Right-handed alpha
Helix 132	AO6	M	1277	1296	Right-handed alpha
Helix 133	AO7	M	1298	1302	Right-handed 310
Helix 134	AO8	M	1305	1315	Right-handed alpha
Helix 135	AO9	M	1319	1327	Right-handed alpha
Helix 136	AP1	M	1335	1347	Right-handed alpha
Helix 137	AP2	M	1353	1365	Right-handed alpha
Helix 138	AP3	M	1366	1369	Right-handed 310
Helix 139	AP4	M	1373	1386	Right-handed alpha
Helix 140	AP5	M	1389	1404	Right-handed alpha
Helix 141	AP6	M	1409	1424	Right-handed alpha
Helix 142	AP7	M	1657	1662	Right-handed alpha
Helix 143	AP8	M	1662	1682	Right-handed alpha
Helix 144	AP9	M	1692	1704	Right-handed alpha
Helix 145	AQ1	M	1705	1709	Right-handed 310
Helix 146	AQ2	M	1713	1726	Right-handed alpha
Helix 147	AQ3	M	1728	1743	Right-handed alpha
Helix 148	AQ4	M	1755	1778	Right-handed alpha
Helix 149	AQ5	M	1780	1782	Right-handed 310
Helix 150	AQ6	M	1783	1799	Right-handed alpha
Helix 151	AQ7	M	1801	1817	Right-handed alpha
Helix 152	AQ8	M	1821	1835	Right-handed alpha

There are 15 sheets in PDB entry 9RWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	625	631	first strand
Strand 2	A	611	617	anti-parallel
Strand 3	A	591	599	anti-parallel
Strand 4	A	663	669	parallel
Strand 5	A	701	708	parallel
Strand 6	A	763	770	anti-parallel
Strand 7	A	747	751	anti-parallel
Strand 8	A	734	736	anti-parallel
Strand 9	A	406	412	anti-parallel
Strand 10	A	36	42	anti-parallel
Strand 11	A	715	717	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	177	first strand
Strand 2	A	180	183	anti-parallel
Strand 3	A	196	208	anti-parallel
Strand 4	A	213	225	anti-parallel
Strand 5	A	44	48	anti-parallel
Strand 6	A	400	401	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	94	first strand
Strand 2	A	100	102	anti-parallel
Strand 3	A	53	62	anti-parallel
Strand 4	A	126	139	anti-parallel
Strand 5	A	113	119	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	346	first strand
Strand 2	A	266	268	anti-parallel
Strand 3	A	279	288	anti-parallel
Strand 4	A	326	331	anti-parallel
Strand 5	A	335	339	anti-parallel
Strand 6	N	311	313	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	297	first strand
Strand 2	A	303	307	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	427	428	first strand
Strand 2	A	418	419	anti-parallel
Strand 3	A	577	578	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	492	494	first strand
Strand 2	A	453	455	parallel
Strand 3	A	519	522	parallel
Strand 4	A	545	548	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	75	first strand
Strand 2	B	3	9	parallel
Strand 3	B	12	18	anti-parallel
Strand 4	E	28	32	parallel
Strand 5	E	18	22	anti-parallel
Strand 6	E	59	61	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	49	50	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	75	first strand
Strand 2	C	2	9	parallel
Strand 3	C	12	19	anti-parallel
Strand 4	D	28	32	parallel
Strand 5	D	18	22	anti-parallel
Strand 6	D	59	61	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	46	first strand
Strand 2	C	49	50	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	20	first strand
Strand 2	M	271	273	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	18	20	first strand
Strand 2	N	271	273	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	183	188	first strand
Strand 2	N	173	178	anti-parallel
Strand 3	N	155	160	anti-parallel
Strand 4	N	146	152	anti-parallel
Strand 5	N	215	217	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	183	187	first strand
Strand 2	M	173	178	anti-parallel
Strand 3	M	155	160	anti-parallel
Strand 4	M	146	152	anti-parallel
Strand 5	M	215	217	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RWZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RWZ