Analysis of interatomic Contacts of Structural Units in PDB entry:
9RX5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RX5 entry

There are 6 chains in PDB entry 9RX5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 4	PHE 871
B	GLY 2	LYS 1358
C	SER 15	LYS 450
D	VAL 33	MET 463
E	GLY 15	ASN 184
F	THR 14	ASN 184

There are124 helices in PDB entry 9RX5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	41	Right-handed alpha
Helix 2	AA2	A	42	47	Right-handed 310
Helix 3	AA3	A	98	100	Right-handed 310
Helix 4	AA4	A	172	184	Right-handed alpha
Helix 5	AA5	A	190	211	Right-handed alpha
Helix 6	AA6	A	264	275	Right-handed alpha
Helix 7	AA7	A	280	286	Right-handed alpha
Helix 8	AA8	A	289	301	Right-handed alpha
Helix 9	AA9	A	309	319	Right-handed alpha
Helix 10	AB1	A	321	328	Right-handed 310
Helix 11	AB2	A	329	334	Right-handed alpha
Helix 12	AB3	A	341	353	Right-handed alpha
Helix 13	AB4	A	361	365	Right-handed 310
Helix 14	AB5	A	373	385	Right-handed alpha
Helix 15	AB6	A	392	394	Right-handed 310
Helix 16	AB7	A	395	403	Right-handed alpha
Helix 17	AB8	A	407	412	Right-handed alpha
Helix 18	AB9	A	474	484	Right-handed alpha
Helix 19	AC1	A	486	501	Right-handed alpha
Helix 20	AC2	A	503	510	Right-handed alpha
Helix 21	AC3	A	510	530	Right-handed alpha
Helix 22	AC4	A	532	562	Right-handed alpha
Helix 23	AC5	A	565	578	Right-handed alpha
Helix 24	AC6	A	641	660	Right-handed alpha
Helix 25	AC7	A	690	698	Right-handed alpha
Helix 26	AC8	A	699	708	Right-handed alpha
Helix 27	AC9	A	718	740	Right-handed alpha
Helix 28	AD1	A	780	787	Right-handed alpha
Helix 29	AD2	A	792	810	Right-handed alpha
Helix 30	AD3	A	812	821	Right-handed alpha
Helix 31	AD4	A	822	824	Right-handed 310
Helix 32	AD5	A	828	834	Right-handed alpha
Helix 33	AD6	A	837	847	Right-handed alpha
Helix 34	AD7	A	851	869	Right-handed alpha
Helix 35	AD8	B	3	7	Right-handed alpha
Helix 36	AD9	B	18	22	Right-handed 310
Helix 37	AE1	B	64	79	Right-handed alpha
Helix 38	AE2	B	110	114	Right-handed alpha
Helix 39	AE3	B	121	141	Right-handed alpha
Helix 40	AE4	B	150	152	Right-handed 310
Helix 41	AE5	B	182	187	Right-handed alpha
Helix 42	AE6	B	198	200	Right-handed 310
Helix 43	AE7	B	237	253	Right-handed alpha
Helix 44	AE8	B	260	270	Right-handed alpha
Helix 45	AE9	B	277	281	Right-handed 310
Helix 46	AF1	B	283	294	Right-handed alpha
Helix 47	AF2	B	303	311	Right-handed alpha
Helix 48	AF3	B	323	329	Right-handed alpha
Helix 49	AF4	B	338	358	Right-handed alpha
Helix 50	AF5	B	374	385	Right-handed alpha
Helix 51	AF6	B	391	406	Right-handed alpha
Helix 52	AF7	B	407	409	Right-handed 310
Helix 53	AF8	B	410	418	Right-handed alpha
Helix 54	AF9	B	418	425	Right-handed alpha
Helix 55	AG1	B	426	428	Right-handed 310
Helix 56	AG2	B	430	445	Right-handed alpha
Helix 57	AG3	B	446	448	Right-handed 310
Helix 58	AG4	B	462	468	Right-handed alpha
Helix 59	AG5	B	469	473	Right-handed 310
Helix 60	AG6	B	475	483	Right-handed alpha
Helix 61	AG7	B	485	506	Right-handed alpha
Helix 62	AG8	B	523	546	Right-handed alpha
Helix 63	AG9	B	549	559	Right-handed alpha
Helix 64	AH1	B	560	569	Right-handed alpha
Helix 65	AH2	B	569	576	Right-handed alpha
Helix 66	AH3	B	582	587	Right-handed 310
Helix 67	AH4	B	590	609	Right-handed alpha
Helix 68	AH5	B	610	615	Right-handed 310
Helix 69	AH6	B	616	624	Right-handed alpha
Helix 70	AH7	B	628	645	Right-handed alpha
Helix 71	AH8	B	651	661	Right-handed alpha
Helix 72	AH9	B	662	666	Right-handed 310
Helix 73	AI1	B	668	686	Right-handed alpha
Helix 74	AI2	B	687	694	Right-handed alpha
Helix 75	AI3	B	695	700	Right-handed 310
Helix 76	AI4	B	716	720	Right-handed 310
Helix 77	AI5	B	725	735	Right-handed alpha
Helix 78	AI6	B	737	753	Right-handed alpha
Helix 79	AI7	B	764	778	Right-handed alpha
Helix 80	AI8	B	781	789	Right-handed alpha
Helix 81	AI9	B	790	809	Right-handed alpha
Helix 82	AJ1	B	810	813	Right-handed 310
Helix 83	AJ2	B	821	825	Right-handed alpha
Helix 84	AJ3	B	940	966	Right-handed alpha
Helix 85	AJ4	B	1272	1276	Right-handed 310
Helix 86	AJ5	C	29	34	Right-handed alpha
Helix 87	AJ6	C	35	43	Right-handed alpha
Helix 88	AJ7	C	111	128	Right-handed alpha
Helix 89	AJ8	C	138	169	Right-handed alpha
Helix 90	AJ9	C	170	172	Right-handed 310
Helix 91	AK1	C	176	267	Right-handed alpha
Helix 92	AK2	C	268	274	Right-handed alpha
Helix 93	AK3	C	299	322	Right-handed alpha
Helix 94	AK4	C	333	336	Right-handed 310
Helix 95	AK5	C	355	361	Right-handed 310
Helix 96	AK6	C	362	384	Right-handed alpha
Helix 97	AK7	C	421	444	Right-handed alpha
Helix 98	AK8	C	446	450	Right-handed 310
Helix 99	AK9	D	41	45	Right-handed 310
Helix 100	AL1	D	57	61	Right-handed 310
Helix 101	AL2	D	136	138	Right-handed 310
Helix 102	AL3	D	192	226	Right-handed alpha
Helix 103	AL4	D	227	290	Right-handed alpha
Helix 104	AL5	D	291	325	Right-handed alpha
Helix 105	AL6	D	326	328	Right-handed 310
Helix 106	AL7	D	348	353	Right-handed alpha
Helix 107	AL8	D	359	378	Right-handed alpha
Helix 108	AL9	D	389	392	Right-handed 310
Helix 109	AM1	D	405	407	Right-handed 310
Helix 110	AM2	D	419	439	Right-handed alpha
Helix 111	AM3	D	450	459	Right-handed 310
Helix 112	AM4	E	32	42	Right-handed alpha
Helix 113	AM5	E	79	83	Right-handed 310
Helix 114	AM6	E	86	91	Right-handed alpha
Helix 115	AM7	E	104	122	Right-handed alpha
Helix 116	AM8	E	134	141	Right-handed 310
Helix 117	AM9	E	144	155	Right-handed alpha
Helix 118	AN1	E	169	181	Right-handed alpha
Helix 119	AN2	F	32	41	Right-handed alpha
Helix 120	AN3	F	85	90	Right-handed alpha
Helix 121	AN4	F	104	121	Right-handed alpha
Helix 122	AN5	F	134	141	Right-handed 310
Helix 123	AN6	F	144	156	Right-handed alpha
Helix 124	AN7	F	169	181	Right-handed alpha

There are 29 sheets in PDB entry 9RX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	233	first strand
Strand 2	A	6	10	parallel
Strand 3	B	829	832	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	74	75	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	104	115	anti-parallel
Strand 4	A	118	128	anti-parallel
Strand 5	A	140	147	anti-parallel
Strand 6	A	215	220	anti-parallel
Strand 7	A	18	27	anti-parallel
Strand 8	A	86	96	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	225	first strand
Strand 2	B	818	820	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	592	first strand
Strand 2	A	600	604	anti-parallel
Strand 3	A	619	625	anti-parallel
Strand 4	A	610	611	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	592	first strand
Strand 2	A	600	604	anti-parallel
Strand 3	A	619	625	anti-parallel
Strand 4	A	630	637	anti-parallel
Strand 5	A	679	683	anti-parallel
Strand 6	A	672	674	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	688	689	first strand
Strand 2	A	749	751	anti-parallel
Strand 3	A	757	759	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	34	first strand
Strand 2	B	39	44	anti-parallel
Strand 3	B	49	56	anti-parallel
Strand 4	B	98	104	anti-parallel
Strand 5	B	89	91	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	154	156	anti-parallel
Strand 3	B	162	164	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	176	first strand
Strand 2	B	202	203	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	998	1001	first strand
Strand 2	B	1007	1011	anti-parallel
Strand 3	B	1017	1021	anti-parallel
Strand 4	B	1036	1038	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1045	1050	first strand
Strand 2	B	1057	1061	anti-parallel
Strand 3	B	1065	1068	anti-parallel
Strand 4	B	1088	1089	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1100	1103	first strand
Strand 2	B	1111	1115	anti-parallel
Strand 3	B	1120	1125	anti-parallel
Strand 4	B	1131	1136	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1144	1149	first strand
Strand 2	B	1155	1160	anti-parallel
Strand 3	B	1165	1169	anti-parallel
Strand 4	B	1174	1175	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1187	1192	first strand
Strand 2	B	1199	1204	anti-parallel
Strand 3	B	1210	1214	anti-parallel
Strand 4	B	1222	1225	anti-parallel
Strand 5	B	1298	1304	parallel
Strand 6	B	1289	1295	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1242	1247	first strand
Strand 2	B	1255	1260	anti-parallel
Strand 3	B	1265	1269	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1332	1339	first strand
Strand 2	B	1343	1349	anti-parallel
Strand 3	B	1355	1357	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	17	first strand
Strand 2	C	24	25	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	279	first strand
Strand 2	C	282	285	anti-parallel
Strand 3	C	288	289	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	331	first strand
Strand 2	C	338	341	anti-parallel
Strand 3	C	349	350	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	397	first strand
Strand 2	C	402	405	anti-parallel
Strand 3	C	413	414	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	50	first strand
Strand 2	D	153	157	anti-parallel
Strand 3	D	160	163	anti-parallel
Strand 4	D	139	142	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	82	first strand
Strand 2	D	63	69	anti-parallel
Strand 3	D	112	121	anti-parallel
Strand 4	D	124	134	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	331	333	first strand
Strand 2	D	339	341	anti-parallel
Strand 3	D	344	345	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	386	387	first strand
Strand 2	D	394	396	anti-parallel
Strand 3	D	409	411	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	58	first strand
Strand 2	E	68	75	anti-parallel
Strand 3	E	62	63	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	58	first strand
Strand 2	E	68	75	anti-parallel
Strand 3	E	18	27	parallel
Strand 4	E	95	101	parallel
Strand 5	E	127	133	parallel
Strand 6	E	158	161	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	58	first strand
Strand 2	F	67	75	anti-parallel
Strand 3	F	62	64	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	58	first strand
Strand 2	F	67	75	anti-parallel
Strand 3	F	18	27	parallel
Strand 4	F	95	101	parallel
Strand 5	F	127	133	parallel
Strand 6	F	158	161	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RX5

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RX5