Analysis of interatomic Contacts of Structural Units in PDB entry:
9RX6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RX6 entry

There are 5 chains in PDB entry 9RX6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 4	PHE 871
B	GLY 2	LYS 1358
C	SER 15	LYS 450
D	VAL 33	MET 463
F	LYS 17	ASN 184

There are129 helices in PDB entry 9RX6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	41	Right-handed alpha
Helix 2	AA2	A	42	47	Right-handed 310
Helix 3	AA3	A	98	100	Right-handed 310
Helix 4	AA4	A	172	184	Right-handed alpha
Helix 5	AA5	A	190	212	Right-handed alpha
Helix 6	AA6	A	264	275	Right-handed alpha
Helix 7	AA7	A	280	284	Right-handed 310
Helix 8	AA8	A	289	301	Right-handed alpha
Helix 9	AA9	A	309	319	Right-handed alpha
Helix 10	AB1	A	321	326	Right-handed 310
Helix 11	AB2	A	327	328	Right-handed 310
Helix 12	AB3	A	329	335	Right-handed alpha
Helix 13	AB4	A	341	354	Right-handed alpha
Helix 14	AB5	A	361	368	Right-handed 310
Helix 15	AB6	A	373	388	Right-handed alpha
Helix 16	AB7	A	395	402	Right-handed alpha
Helix 17	AB8	A	403	406	Right-handed 310
Helix 18	AB9	A	408	413	Right-handed alpha
Helix 19	AC1	A	476	484	Right-handed alpha
Helix 20	AC2	A	486	502	Right-handed alpha
Helix 21	AC3	A	503	510	Right-handed alpha
Helix 22	AC4	A	510	529	Right-handed alpha
Helix 23	AC5	A	532	561	Right-handed alpha
Helix 24	AC6	A	565	578	Right-handed alpha
Helix 25	AC7	A	579	584	Right-handed alpha
Helix 26	AC8	A	641	660	Right-handed alpha
Helix 27	AC9	A	690	697	Right-handed alpha
Helix 28	AD1	A	699	708	Right-handed alpha
Helix 29	AD2	A	713	717	Right-handed 310
Helix 30	AD3	A	718	740	Right-handed alpha
Helix 31	AD4	A	780	786	Right-handed alpha
Helix 32	AD5	A	792	811	Right-handed alpha
Helix 33	AD6	A	812	822	Right-handed alpha
Helix 34	AD7	A	837	844	Right-handed alpha
Helix 35	AD8	A	851	868	Right-handed alpha
Helix 36	AD9	A	869	871	Right-handed 310
Helix 37	AE1	B	64	78	Right-handed alpha
Helix 38	AE2	B	110	115	Right-handed alpha
Helix 39	AE3	B	121	142	Right-handed alpha
Helix 40	AE4	B	150	152	Right-handed 310
Helix 41	AE5	B	182	187	Right-handed alpha
Helix 42	AE6	B	198	200	Right-handed 310
Helix 43	AE7	B	204	213	Right-handed alpha
Helix 44	AE8	B	229	233	Right-handed alpha
Helix 45	AE9	B	236	239	Right-handed 310
Helix 46	AF1	B	240	253	Right-handed alpha
Helix 47	AF2	B	260	269	Right-handed alpha
Helix 48	AF3	B	276	281	Right-handed 310
Helix 49	AF4	B	283	294	Right-handed alpha
Helix 50	AF5	B	297	301	Right-handed 310
Helix 51	AF6	B	303	311	Right-handed alpha
Helix 52	AF7	B	317	323	Right-handed alpha
Helix 53	AF8	B	323	329	Right-handed alpha
Helix 54	AF9	B	330	333	Right-handed 310
Helix 55	AG1	B	338	349	Right-handed alpha
Helix 56	AG2	B	349	358	Right-handed alpha
Helix 57	AG3	B	374	384	Right-handed alpha
Helix 58	AG4	B	391	406	Right-handed alpha
Helix 59	AG5	B	407	409	Right-handed 310
Helix 60	AG6	B	410	417	Right-handed alpha
Helix 61	AG7	B	418	424	Right-handed alpha
Helix 62	AG8	B	430	446	Right-handed alpha
Helix 63	AG9	B	463	468	Right-handed alpha
Helix 64	AH1	B	469	473	Right-handed 310
Helix 65	AH2	B	475	506	Right-handed alpha
Helix 66	AH3	B	523	545	Right-handed alpha
Helix 67	AH4	B	549	559	Right-handed alpha
Helix 68	AH5	B	560	569	Right-handed alpha
Helix 69	AH6	B	569	576	Right-handed alpha
Helix 70	AH7	B	576	581	Right-handed alpha
Helix 71	AH8	B	582	587	Right-handed 310
Helix 72	AH9	B	590	600	Right-handed alpha
Helix 73	AI1	B	600	609	Right-handed alpha
Helix 74	AI2	B	612	624	Right-handed alpha
Helix 75	AI3	B	628	646	Right-handed alpha
Helix 76	AI4	B	650	661	Right-handed alpha
Helix 77	AI5	B	662	666	Right-handed 310
Helix 78	AI6	B	668	686	Right-handed alpha
Helix 79	AI7	B	687	694	Right-handed alpha
Helix 80	AI8	B	694	699	Right-handed alpha
Helix 81	AI9	B	714	719	Right-handed alpha
Helix 82	AJ1	B	725	735	Right-handed alpha
Helix 83	AJ2	B	737	753	Right-handed alpha
Helix 84	AJ3	B	764	778	Right-handed alpha
Helix 85	AJ4	B	780	790	Right-handed alpha
Helix 86	AJ5	B	790	809	Right-handed alpha
Helix 87	AJ6	B	810	813	Right-handed 310
Helix 88	AJ7	B	821	825	Right-handed alpha
Helix 89	AJ8	B	940	966	Right-handed alpha
Helix 90	AJ9	B	1023	1025	Right-handed 310
Helix 91	AK1	B	1138	1142	Right-handed 310
Helix 92	AK2	B	1272	1276	Right-handed 310
Helix 93	AK3	C	28	33	Right-handed alpha
Helix 94	AK4	C	35	43	Right-handed alpha
Helix 95	AK5	C	111	128	Right-handed alpha
Helix 96	AK6	C	137	169	Right-handed alpha
Helix 97	AK7	C	170	172	Right-handed 310
Helix 98	AK8	C	176	267	Right-handed alpha
Helix 99	AK9	C	310	316	Right-handed 310
Helix 100	AL1	C	317	322	Right-handed alpha
Helix 101	AL2	C	333	336	Right-handed 310
Helix 102	AL3	C	355	362	Right-handed 310
Helix 103	AL4	C	363	368	Right-handed 310
Helix 104	AL5	C	369	374	Right-handed 310
Helix 105	AL6	C	376	381	Right-handed alpha
Helix 106	AL7	C	421	428	Right-handed 310
Helix 107	AL8	C	429	439	Right-handed alpha
Helix 108	AL9	C	440	443	Right-handed 310
Helix 109	AM1	D	41	45	Right-handed 310
Helix 110	AM2	D	57	61	Right-handed 310
Helix 111	AM3	D	136	138	Right-handed 310
Helix 112	AM4	D	192	224	Right-handed alpha
Helix 113	AM5	D	227	324	Right-handed alpha
Helix 114	AM6	D	325	329	Right-handed 310
Helix 115	AM7	D	351	355	Right-handed 310
Helix 116	AM8	D	359	364	Right-handed alpha
Helix 117	AM9	D	364	378	Right-handed alpha
Helix 118	AN1	D	389	392	Right-handed 310
Helix 119	AN2	D	400	404	Right-handed 310
Helix 120	AN3	D	420	422	Right-handed 310
Helix 121	AN4	D	423	434	Right-handed alpha
Helix 122	AN5	D	434	439	Right-handed alpha
Helix 123	AN6	F	32	42	Right-handed alpha
Helix 124	AN7	F	79	86	Right-handed alpha
Helix 125	AN8	F	86	91	Right-handed alpha
Helix 126	AN9	F	104	121	Right-handed alpha
Helix 127	AO1	F	134	141	Right-handed 310
Helix 128	AO2	F	144	155	Right-handed alpha
Helix 129	AO3	F	171	181	Right-handed alpha

There are 24 sheets in PDB entry 9RX6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	818	820	first strand
Strand 2	A	223	226	parallel
Strand 3	A	229	233	anti-parallel
Strand 4	A	6	10	parallel
Strand 5	B	829	832	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	74	75	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	105	115	anti-parallel
Strand 4	A	118	128	anti-parallel
Strand 5	A	140	147	anti-parallel
Strand 6	A	215	221	anti-parallel
Strand 7	A	18	27	anti-parallel
Strand 8	A	86	96	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	592	first strand
Strand 2	A	600	611	anti-parallel
Strand 3	A	619	625	anti-parallel
Strand 4	A	630	637	anti-parallel
Strand 5	A	679	683	anti-parallel
Strand 6	A	672	674	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	688	689	first strand
Strand 2	A	749	751	anti-parallel
Strand 3	A	757	759	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	34	first strand
Strand 2	B	39	44	anti-parallel
Strand 3	B	49	56	anti-parallel
Strand 4	B	98	104	anti-parallel
Strand 5	B	89	91	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	154	156	anti-parallel
Strand 3	B	162	164	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	176	first strand
Strand 2	B	202	203	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	998	1001	first strand
Strand 2	B	1007	1011	anti-parallel
Strand 3	B	1017	1021	anti-parallel
Strand 4	B	1037	1038	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1045	1050	first strand
Strand 2	B	1057	1061	anti-parallel
Strand 3	B	1065	1068	anti-parallel
Strand 4	B	1088	1089	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1097	1103	first strand
Strand 2	B	1111	1116	anti-parallel
Strand 3	B	1120	1125	anti-parallel
Strand 4	B	1131	1136	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1144	1146	first strand
Strand 2	B	1155	1160	anti-parallel
Strand 3	B	1164	1169	anti-parallel
Strand 4	B	1175	1180	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1187	1192	first strand
Strand 2	B	1199	1204	anti-parallel
Strand 3	B	1210	1214	anti-parallel
Strand 4	B	1219	1225	anti-parallel
Strand 5	B	1298	1304	parallel
Strand 6	B	1289	1295	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1246	1247	first strand
Strand 2	B	1255	1258	anti-parallel
Strand 3	B	1264	1269	anti-parallel
Strand 4	B	1279	1281	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1332	1339	first strand
Strand 2	B	1343	1349	anti-parallel
Strand 3	B	1354	1357	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	17	first strand
Strand 2	C	24	25	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	279	first strand
Strand 2	C	282	285	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	331	first strand
Strand 2	C	338	341	anti-parallel
Strand 3	C	348	350	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	397	first strand
Strand 2	C	402	405	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	50	first strand
Strand 2	D	153	156	anti-parallel
Strand 3	D	161	163	anti-parallel
Strand 4	D	139	142	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	81	82	first strand
Strand 2	D	63	69	anti-parallel
Strand 3	D	112	121	anti-parallel
Strand 4	D	124	134	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	331	332	first strand
Strand 2	D	340	341	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	386	387	first strand
Strand 2	D	394	396	anti-parallel
Strand 3	D	409	411	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	58	64	first strand
Strand 2	F	67	75	anti-parallel
Strand 3	F	20	27	parallel
Strand 4	F	95	101	parallel
Strand 5	F	127	133	parallel
Strand 6	F	158	161	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RX6

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RX6