Analysis of interatomic Contacts of Structural Units in PDB entry:
9RX7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RX7 entry

There are 6 chains in PDB entry 9RX7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PHE 871
B	GLY 2	LYS 1358
C	GLU 110	PHE 447
D	ALA 39	LEU 401
I	PHE 16	PRO 24
L	LEU -6	GLN 79

There are126 helices in PDB entry 9RX7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	39	Right-handed alpha
Helix 2	AA2	A	41	47	Right-handed 310
Helix 3	AA3	A	98	100	Right-handed 310
Helix 4	AA4	A	173	178	Right-handed alpha
Helix 5	AA5	A	178	184	Right-handed alpha
Helix 6	AA6	A	193	201	Right-handed alpha
Helix 7	AA7	A	204	212	Right-handed alpha
Helix 8	AA8	A	264	275	Right-handed alpha
Helix 9	AA9	A	279	283	Right-handed 310
Helix 10	AB1	A	289	301	Right-handed alpha
Helix 11	AB2	A	309	319	Right-handed alpha
Helix 12	AB3	A	321	327	Right-handed 310
Helix 13	AB4	A	328	335	Right-handed alpha
Helix 14	AB5	A	341	353	Right-handed alpha
Helix 15	AB6	A	359	364	Right-handed alpha
Helix 16	AB7	A	365	368	Right-handed 310
Helix 17	AB8	A	373	383	Right-handed alpha
Helix 18	AB9	A	396	402	Right-handed alpha
Helix 19	AC1	A	403	406	Right-handed 310
Helix 20	AC2	A	408	413	Right-handed alpha
Helix 21	AC3	A	475	484	Right-handed alpha
Helix 22	AC4	A	486	501	Right-handed alpha
Helix 23	AC5	A	503	510	Right-handed alpha
Helix 24	AC6	A	510	530	Right-handed alpha
Helix 25	AC7	A	532	561	Right-handed alpha
Helix 26	AC8	A	565	578	Right-handed alpha
Helix 27	AC9	A	579	584	Right-handed alpha
Helix 28	AD1	A	641	661	Right-handed alpha
Helix 29	AD2	A	690	697	Right-handed alpha
Helix 30	AD3	A	699	708	Right-handed alpha
Helix 31	AD4	A	713	717	Right-handed 310
Helix 32	AD5	A	718	740	Right-handed alpha
Helix 33	AD6	A	780	788	Right-handed alpha
Helix 34	AD7	A	792	810	Right-handed alpha
Helix 35	AD8	A	812	822	Right-handed alpha
Helix 36	AD9	A	823	825	Right-handed 310
Helix 37	AE1	A	828	833	Right-handed alpha
Helix 38	AE2	A	837	844	Right-handed alpha
Helix 39	AE3	A	851	871	Right-handed alpha
Helix 40	AE4	B	15	20	Right-handed alpha
Helix 41	AE5	B	64	78	Right-handed alpha
Helix 42	AE6	B	79	81	Right-handed 310
Helix 43	AE7	B	109	115	Right-handed alpha
Helix 44	AE8	B	121	143	Right-handed alpha
Helix 45	AE9	B	150	154	Right-handed 310
Helix 46	AF1	B	180	187	Right-handed alpha
Helix 47	AF2	B	198	202	Right-handed 310
Helix 48	AF3	B	204	215	Right-handed alpha
Helix 49	AF4	B	237	253	Right-handed alpha
Helix 50	AF5	B	260	269	Right-handed alpha
Helix 51	AF6	B	274	279	Right-handed alpha
Helix 52	AF7	B	283	294	Right-handed alpha
Helix 53	AF8	B	297	301	Right-handed 310
Helix 54	AF9	B	303	311	Right-handed alpha
Helix 55	AG1	B	317	323	Right-handed alpha
Helix 56	AG2	B	323	329	Right-handed alpha
Helix 57	AG3	B	338	349	Right-handed alpha
Helix 58	AG4	B	349	357	Right-handed alpha
Helix 59	AG5	B	374	384	Right-handed alpha
Helix 60	AG6	B	391	405	Right-handed alpha
Helix 61	AG7	B	410	418	Right-handed alpha
Helix 62	AG8	B	418	425	Right-handed alpha
Helix 63	AG9	B	426	428	Right-handed 310
Helix 64	AH1	B	430	445	Right-handed alpha
Helix 65	AH2	B	446	448	Right-handed 310
Helix 66	AH3	B	457	467	Right-handed alpha
Helix 67	AH4	B	468	473	Right-handed 310
Helix 68	AH5	B	475	485	Right-handed alpha
Helix 69	AH6	B	485	510	Right-handed alpha
Helix 70	AH7	B	522	545	Right-handed alpha
Helix 71	AH8	B	549	560	Right-handed alpha
Helix 72	AH9	B	560	569	Right-handed alpha
Helix 73	AI1	B	569	576	Right-handed alpha
Helix 74	AI2	B	576	582	Right-handed alpha
Helix 75	AI3	B	583	587	Right-handed 310
Helix 76	AI4	B	591	600	Right-handed alpha
Helix 77	AI5	B	601	609	Right-handed alpha
Helix 78	AI6	B	612	624	Right-handed alpha
Helix 79	AI7	B	628	646	Right-handed alpha
Helix 80	AI8	B	649	661	Right-handed alpha
Helix 81	AI9	B	662	666	Right-handed 310
Helix 82	AJ1	B	668	686	Right-handed alpha
Helix 83	AJ2	B	687	695	Right-handed alpha
Helix 84	AJ3	B	695	700	Right-handed alpha
Helix 85	AJ4	B	701	703	Right-handed 310
Helix 86	AJ5	B	712	717	Right-handed alpha
Helix 87	AJ6	B	725	734	Right-handed alpha
Helix 88	AJ7	B	737	753	Right-handed alpha
Helix 89	AJ8	B	764	777	Right-handed alpha
Helix 90	AJ9	B	780	789	Right-handed alpha
Helix 91	AK1	B	790	801	Right-handed alpha
Helix 92	AK2	B	801	809	Right-handed alpha
Helix 93	AK3	B	821	825	Right-handed alpha
Helix 94	AK4	B	940	962	Right-handed alpha
Helix 95	AK5	B	963	965	Right-handed 310
Helix 96	AK6	B	1022	1027	Right-handed alpha
Helix 97	AK7	B	1138	1142	Right-handed 310
Helix 98	AK8	B	1272	1276	Right-handed 310
Helix 99	AK9	C	111	127	Right-handed alpha
Helix 100	AL1	C	139	172	Right-handed alpha
Helix 101	AL2	C	175	178	Right-handed 310
Helix 102	AL3	C	179	189	Right-handed alpha
Helix 103	AL4	C	193	215	Right-handed alpha
Helix 104	AL5	C	218	265	Right-handed alpha
Helix 105	AL6	C	268	274	Right-handed alpha
Helix 106	AL7	C	304	322	Right-handed alpha
Helix 107	AL8	C	333	336	Right-handed 310
Helix 108	AL9	C	357	361	Right-handed 310
Helix 109	AM1	C	365	384	Right-handed alpha
Helix 110	AM2	C	422	446	Right-handed alpha
Helix 111	AM3	D	55	62	Right-handed alpha
Helix 112	AM4	D	74	100	Right-handed alpha
Helix 113	AM5	D	102	132	Right-handed alpha
Helix 114	AM6	D	133	146	Right-handed alpha
Helix 115	AM7	D	147	187	Right-handed alpha
Helix 116	AM8	D	189	205	Right-handed alpha
Helix 117	AM9	D	275	281	Right-handed 310
Helix 118	AN1	D	298	321	Right-handed alpha
Helix 119	AN2	D	330	335	Right-handed 310
Helix 120	AN3	D	342	360	Right-handed alpha
Helix 121	AN4	D	361	363	Right-handed 310
Helix 122	AN5	D	365	369	Right-handed 310
Helix 123	AN6	D	373	383	Right-handed alpha
Helix 124	AN7	L	6	24	Right-handed alpha
Helix 125	AN8	L	26	44	Right-handed alpha
Helix 126	AN9	L	51	79	Right-handed alpha

There are 17 sheets in PDB entry 9RX7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	10	first strand
Strand 2	A	229	233	parallel
Strand 3	A	223	226	anti-parallel
Strand 4	B	818	820	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	74	75	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	69	first strand
Strand 2	A	58	65	anti-parallel
Strand 3	A	104	113	anti-parallel
Strand 4	A	119	128	anti-parallel
Strand 5	A	140	147	anti-parallel
Strand 6	A	215	220	anti-parallel
Strand 7	A	18	27	anti-parallel
Strand 8	A	85	96	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	592	first strand
Strand 2	A	600	611	anti-parallel
Strand 3	A	619	625	anti-parallel
Strand 4	A	630	637	anti-parallel
Strand 5	A	679	683	anti-parallel
Strand 6	A	672	674	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	688	689	first strand
Strand 2	A	749	751	anti-parallel
Strand 3	A	757	759	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	34	first strand
Strand 2	B	39	44	anti-parallel
Strand 3	B	49	56	anti-parallel
Strand 4	B	98	104	anti-parallel
Strand 5	B	89	91	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	984	989	first strand
Strand 2	B	1354	1358	anti-parallel
Strand 3	B	1343	1349	anti-parallel
Strand 4	B	1332	1339	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	996	1001	first strand
Strand 2	B	1007	1012	anti-parallel
Strand 3	B	1017	1021	anti-parallel
Strand 4	B	1036	1038	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1045	1051	first strand
Strand 2	B	1056	1061	anti-parallel
Strand 3	B	1065	1069	anti-parallel
Strand 4	B	1084	1089	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1100	1105	first strand
Strand 2	B	1110	1115	anti-parallel
Strand 3	B	1120	1125	anti-parallel
Strand 4	B	1134	1136	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1146	1149	first strand
Strand 2	B	1155	1159	anti-parallel
Strand 3	B	1164	1169	anti-parallel
Strand 4	B	1174	1180	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1187	1192	first strand
Strand 2	B	1199	1204	anti-parallel
Strand 3	B	1209	1214	anti-parallel
Strand 4	B	1219	1225	anti-parallel
Strand 5	B	1298	1304	parallel
Strand 6	B	1289	1295	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1242	1249	first strand
Strand 2	B	1254	1260	anti-parallel
Strand 3	B	1265	1269	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	279	first strand
Strand 2	C	282	285	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	331	first strand
Strand 2	C	338	341	anti-parallel
Strand 3	C	348	350	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	396	397	first strand
Strand 2	C	402	404	anti-parallel
Strand 3	C	412	414	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	209	first strand
Strand 2	D	261	263	anti-parallel
Strand 3	D	269	270	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RX7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RX7