Analysis of interatomic Contacts of Structural Units in PDB entry:
9RXI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9RXI entry

There are 6 chains in PDB entry 9RXI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 12	HIS 384
B	GLU 12	HIS 384
C	GLU 12	LEU 383
D	GLU 12	LEU 383
H	GLN 1	SER 130
E	GLN 1	SER 130

There are 53 helices in PDB entry 9RXI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	33	Right-handed alpha
Helix 2	AA2	A	36	45	Right-handed alpha
Helix 3	AA3	A	101	106	Right-handed alpha
Helix 4	AA4	A	111	115	Right-handed 310
Helix 5	AA5	A	164	169	Right-handed alpha
Helix 6	AA6	A	179	187	Right-handed 310
Helix 7	AA7	A	189	197	Right-handed alpha
Helix 8	AA8	A	227	231	Right-handed 310
Helix 9	AA9	A	279	290	Right-handed alpha
Helix 10	AB1	A	325	329	Right-handed alpha
Helix 11	AB2	A	359	365	Right-handed alpha
Helix 12	AB3	B	25	33	Right-handed alpha
Helix 13	AB4	B	36	45	Right-handed alpha
Helix 14	AB5	B	101	106	Right-handed alpha
Helix 15	AB6	B	111	115	Right-handed 310
Helix 16	AB7	B	164	169	Right-handed alpha
Helix 17	AB8	B	179	187	Right-handed 310
Helix 18	AB9	B	189	197	Right-handed alpha
Helix 19	AC1	B	227	231	Right-handed 310
Helix 20	AC2	B	279	290	Right-handed alpha
Helix 21	AC3	B	303	310	Right-handed 310
Helix 22	AC4	B	325	329	Right-handed alpha
Helix 23	AC5	B	359	365	Right-handed alpha
Helix 24	AC6	C	25	33	Right-handed alpha
Helix 25	AC7	C	36	45	Right-handed alpha
Helix 26	AC8	C	101	106	Right-handed alpha
Helix 27	AC9	C	111	115	Right-handed 310
Helix 28	AD1	C	164	169	Right-handed alpha
Helix 29	AD2	C	179	183	Right-handed 310
Helix 30	AD3	C	189	197	Right-handed alpha
Helix 31	AD4	C	227	229	Right-handed 310
Helix 32	AD5	C	279	290	Right-handed alpha
Helix 33	AD6	C	303	307	Right-handed 310
Helix 34	AD7	C	325	329	Right-handed alpha
Helix 35	AD8	C	359	364	Right-handed alpha
Helix 36	AD9	D	25	33	Right-handed alpha
Helix 37	AE1	D	36	45	Right-handed alpha
Helix 38	AE2	D	101	106	Right-handed alpha
Helix 39	AE3	D	111	115	Right-handed 310
Helix 40	AE4	D	164	169	Right-handed alpha
Helix 41	AE5	D	183	187	Right-handed 310
Helix 42	AE6	D	189	197	Right-handed alpha
Helix 43	AE7	D	279	290	Right-handed alpha
Helix 44	AE8	D	306	310	Right-handed 310
Helix 45	AE9	D	325	329	Right-handed alpha
Helix 46	AF1	D	359	364	Right-handed alpha
Helix 47	AF2	H	28	32	Right-handed 310
Helix 48	AF3	H	87	91	Right-handed 310
Helix 49	AF4	H	109	114	Right-handed alpha
Helix 50	AF5	E	28	32	Right-handed 310
Helix 51	AF6	E	87	91	Right-handed 310
Helix 52	AF7	E	106	108	Right-handed 310
Helix 53	AF8	E	109	114	Right-handed alpha

There are 29 sheets in PDB entry 9RXI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	127	first strand
Strand 2	A	134	145	anti-parallel
Strand 3	A	66	72	anti-parallel
Strand 4	A	16	22	anti-parallel
Strand 5	A	216	223	anti-parallel
Strand 6	A	204	211	anti-parallel
Strand 7	A	366	371	anti-parallel
Strand 8	A	376	381	anti-parallel
Strand 9	A	236	242	anti-parallel
Strand 10	A	247	250	anti-parallel
Strand 11	A	265	269	anti-parallel
Strand 12	A	355	358	parallel

Back to list of sheets
Back to top of page

There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	127	first strand
Strand 2	A	134	145	anti-parallel
Strand 3	A	148	160	anti-parallel
Strand 4	A	90	93	parallel
Strand 5	A	173	176	anti-parallel
Strand 6	A	77	84	parallel
Strand 7	A	66	72	anti-parallel
Strand 8	A	16	22	anti-parallel
Strand 9	A	216	223	anti-parallel
Strand 10	A	204	211	anti-parallel
Strand 11	A	366	371	anti-parallel
Strand 12	A	376	381	anti-parallel
Strand 13	A	236	242	anti-parallel
Strand 14	A	247	250	anti-parallel
Strand 15	A	265	269	anti-parallel
Strand 16	A	355	358	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	260	first strand
Strand 2	A	252	255	anti-parallel
Strand 3	A	313	317	anti-parallel
Strand 4	A	320	324	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	278	first strand
Strand 2	A	345	347	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	294	first strand
Strand 2	A	300	302	anti-parallel
Strand 3	A	340	343	anti-parallel
Strand 4	A	330	333	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	129	first strand
Strand 2	B	132	145	anti-parallel
Strand 3	B	66	72	anti-parallel
Strand 4	B	16	22	anti-parallel
Strand 5	B	216	223	anti-parallel
Strand 6	B	204	211	anti-parallel
Strand 7	B	366	371	anti-parallel
Strand 8	B	376	381	anti-parallel
Strand 9	B	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	129	first strand
Strand 2	B	132	145	anti-parallel
Strand 3	B	148	160	anti-parallel
Strand 4	B	90	93	parallel
Strand 5	B	173	176	anti-parallel
Strand 6	B	77	84	parallel
Strand 7	B	66	72	anti-parallel
Strand 8	B	16	22	anti-parallel
Strand 9	B	216	223	anti-parallel
Strand 10	B	204	211	anti-parallel
Strand 11	B	366	371	anti-parallel
Strand 12	B	376	381	anti-parallel
Strand 13	B	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	250	first strand
Strand 2	B	265	269	anti-parallel
Strand 3	B	355	358	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	260	first strand
Strand 2	B	252	254	anti-parallel
Strand 3	B	313	317	anti-parallel
Strand 4	B	320	324	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	278	first strand
Strand 2	B	345	347	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	295	first strand
Strand 2	B	299	302	anti-parallel
Strand 3	B	338	343	anti-parallel
Strand 4	B	330	335	anti-parallel

Back to list of sheets
Back to top of page

There are 12 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	129	first strand
Strand 2	C	132	144	anti-parallel
Strand 3	C	66	72	anti-parallel
Strand 4	C	16	22	anti-parallel
Strand 5	C	216	223	anti-parallel
Strand 6	C	204	211	anti-parallel
Strand 7	C	366	371	anti-parallel
Strand 8	C	376	382	anti-parallel
Strand 9	C	231	242	anti-parallel
Strand 10	C	247	250	anti-parallel
Strand 11	C	265	269	anti-parallel
Strand 12	C	355	358	parallel

Back to list of sheets
Back to top of page

There are 16 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	129	first strand
Strand 2	C	132	144	anti-parallel
Strand 3	C	150	160	anti-parallel
Strand 4	C	90	93	parallel
Strand 5	C	173	176	anti-parallel
Strand 6	C	77	84	parallel
Strand 7	C	66	72	anti-parallel
Strand 8	C	16	22	anti-parallel
Strand 9	C	216	223	anti-parallel
Strand 10	C	204	211	anti-parallel
Strand 11	C	366	371	anti-parallel
Strand 12	C	376	382	anti-parallel
Strand 13	C	231	242	anti-parallel
Strand 14	C	247	250	anti-parallel
Strand 15	C	265	269	anti-parallel
Strand 16	C	355	358	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	260	first strand
Strand 2	C	252	255	anti-parallel
Strand 3	C	313	317	anti-parallel
Strand 4	C	320	324	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	278	first strand
Strand 2	C	345	347	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	293	294	first strand
Strand 2	C	300	301	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	330	333	first strand
Strand 2	C	340	343	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	129	first strand
Strand 2	D	132	144	anti-parallel
Strand 3	D	66	72	anti-parallel
Strand 4	D	16	22	anti-parallel
Strand 5	D	216	223	anti-parallel
Strand 6	D	204	211	anti-parallel
Strand 7	D	366	371	anti-parallel
Strand 8	D	376	381	anti-parallel
Strand 9	D	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	129	first strand
Strand 2	D	132	144	anti-parallel
Strand 3	D	149	160	anti-parallel
Strand 4	D	90	93	parallel
Strand 5	D	173	176	anti-parallel
Strand 6	D	77	84	parallel
Strand 7	D	66	72	anti-parallel
Strand 8	D	16	22	anti-parallel
Strand 9	D	216	223	anti-parallel
Strand 10	D	204	211	anti-parallel
Strand 11	D	366	371	anti-parallel
Strand 12	D	376	381	anti-parallel
Strand 13	D	236	239	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	250	first strand
Strand 2	D	265	269	anti-parallel
Strand 3	D	355	358	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	260	first strand
Strand 2	D	252	255	anti-parallel
Strand 3	D	313	317	anti-parallel
Strand 4	D	320	324	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	276	278	first strand
Strand 2	D	345	347	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	293	294	first strand
Strand 2	D	300	302	anti-parallel
Strand 3	D	341	343	anti-parallel
Strand 4	D	330	332	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	124	129	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	13	first strand
Strand 2	H	124	129	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	119	120	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	18	25	anti-parallel
Strand 3	E	78	83	anti-parallel
Strand 4	E	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	124	129	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	33	39	anti-parallel
Strand 5	E	46	51	anti-parallel
Strand 6	E	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	124	129	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	119	120	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9RXI

Analysis of interatomic Contacts of Structural Units in PDB entry:
9RXI