Analysis of interatomic Contacts of Structural Units in PDB entry:
9S19


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9S19 entry

There are 4 chains in PDB entry 9S19 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 530SER 941
B
 LYS 525SER 941
C
 T 2007 C 2011
D
 A 2004 G 2011
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 9S19. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
533 545Right-handed alpha
Helix 2
AA2
A
550 564Right-handed alpha
Helix 3
AA3
A
576 589Right-handed alpha
Helix 4
AA4
A
598 612Right-handed alpha
Helix 5
AA5
A
624 633Right-handed alpha
Helix 6
AA6
A
642 649Right-handed alpha
Helix 7
AA7
A
649 660Right-handed alpha
Helix 8
AA8
A
671 676Right-handed alpha
Helix 9
AA9
A
681 687Right-handed 310
Helix 10
AB1
A
688 694Right-handed alpha
Helix 11
AB2
A
707 719Right-handed alpha
Helix 12
AB3
A
745 751Right-handed alpha
Helix 13
AB4
A
752 754Right-handed 310
Helix 14
AB5
A
773 786Right-handed alpha
Helix 15
AB6
A
799 812Right-handed alpha
Helix 16
AB7
A
844 853Right-handed alpha
Helix 17
AB8
A
869 879Right-handed alpha
Helix 18
AB9
A
891 905Right-handed alpha
Helix 19
AC1
A
908 917Right-handed alpha
Helix 20
AC2
A
924 930Right-handed alpha
Helix 21
AC3
A
936 941Right-handed alpha
Helix 22
AC4
B
533 545Right-handed alpha
Helix 23
AC5
B
550 563Right-handed alpha
Helix 24
AC6
B
576 589Right-handed alpha
Helix 25
AC7
B
598 612Right-handed alpha
Helix 26
AC8
B
624 633Right-handed alpha
Helix 27
AC9
B
642 649Right-handed alpha
Helix 28
AD1
B
649 660Right-handed alpha
Helix 29
AD2
B
671 676Right-handed alpha
Helix 30
AD3
B
681 687Right-handed 310
Helix 31
AD4
B
688 694Right-handed alpha
Helix 32
AD5
B
707 719Right-handed alpha
Helix 33
AD6
B
745 751Right-handed alpha
Helix 34
AD7
B
752 754Right-handed 310
Helix 35
AD8
B
773 786Right-handed alpha
Helix 36
AD9
B
799 812Right-handed alpha
Helix 37
AE1
B
844 854Right-handed alpha
Helix 38
AE2
B
869 882Right-handed alpha
Helix 39
AE3
B
885 905Right-handed alpha
Helix 40
AE4
B
908 918Right-handed alpha
Helix 41
AE5
B
936 941Right-handed alpha
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There are 6 sheets in PDB entry 9S19. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 618first strand
Strand 2
A
638 641parallel
Strand 3
A
591 595parallel
Strand 4
A
662 668parallel
Strand 5
A
699 703parallel
Strand 6
A
567 570parallel
Strand 7
A
724 727parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
735 741first strand
Strand 2
A
862 868parallel
Strand 3
A
835 839parallel
Strand 4
A
767 770parallel
Strand 5
A
817 820parallel
Strand 6
A
791 794parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 756first strand
Strand 2
A
761 762anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
616 618first strand
Strand 2
B
638 641parallel
Strand 3
B
591 595parallel
Strand 4
B
662 668parallel
Strand 5
B
699 703parallel
Strand 6
B
567 570parallel
Strand 7
B
724 727parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
735 741first strand
Strand 2
B
862 868parallel
Strand 3
B
835 839parallel
Strand 4
B
767 770parallel
Strand 5
B
817 820parallel
Strand 6
B
791 794parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
755 756first strand
Strand 2
B
761 762anti-parallel
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