Analysis of interatomic Contacts of Structural Units in PDB entry:
9S2T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9S2T entry

There is 1 chain in PDB entry 9S2T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 669
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9S2T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 50Right-handed alpha
Helix 2
AA2
A
58 69Right-handed alpha
Helix 3
AA3
A
72 76Right-handed 310
Helix 4
AA4
A
84 99Right-handed alpha
Helix 5
AA5
A
106 120Right-handed alpha
Helix 6
AA6
A
124 126Right-handed 310
Helix 7
AA7
A
132 146Right-handed alpha
Helix 8
AA8
A
185 197Right-handed alpha
Helix 9
AA9
A
203 211Right-handed alpha
Helix 10
AB1
A
212 214Right-handed 310
Helix 11
AB2
A
219 224Right-handed alpha
Helix 12
AB3
A
231 233Right-handed 310
Helix 13
AB4
A
245 254Right-handed alpha
Helix 14
AB5
A
266 296Right-handed alpha
Helix 15
AB6
A
304 308Right-handed 310
Helix 16
AB7
A
309 319Right-handed alpha
Helix 17
AB8
A
332 348Right-handed alpha
Helix 18
AB9
A
369 380Right-handed alpha
Helix 19
AC1
A
391 402Right-handed alpha
Helix 20
AC2
A
433 441Right-handed alpha
Helix 21
AC3
A
459 463Right-handed alpha
Helix 22
AC4
A
484 487Right-handed 310
Helix 23
AC5
A
510 525Right-handed alpha
Helix 24
AC6
A
544 555Right-handed alpha
Helix 25
AC7
A
624 632Right-handed alpha
Helix 26
AC8
A
639 643Right-handed 310
Helix 27
AC9
A
648 662Right-handed alpha
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There are 7 sheets in PDB entry 9S2T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 44first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
2 7anti-parallel
Strand 4
A
78 81parallel
Strand 5
A
128 130parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 181first strand
Strand 2
A
162 170anti-parallel
Strand 3
A
151 155anti-parallel
Strand 4
A
299 303parallel
Strand 5
A
324 327parallel
Strand 6
A
470 471parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
235 237anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 387first strand
Strand 2
A
565 569anti-parallel
Strand 3
A
559 562anti-parallel
Strand 4
A
406 409parallel
Strand 5
A
423 428anti-parallel
Strand 6
A
528 533anti-parallel
Strand 7
A
453 456anti-parallel
Strand 8
A
503 505parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 465first strand
Strand 2
A
479 482anti-parallel
Strand 3
A
499 501anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
580 583first strand
Strand 2
A
665 668anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 595first strand
Strand 2
A
606 613anti-parallel
Strand 3
A
620 622anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il