Analysis of interatomic Contacts of Structural Units in PDB entry:
9S67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9S67 entry

There are 3 chains in PDB entry 9S67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	CYS 213
B	GLN 1	PRO 224
C	LYS 19	GLY 580

There are 15 helices in PDB entry 9S67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	120	126	Right-handed alpha
Helix 2	AA2	A	182	188	Right-handed alpha
Helix 3	AA3	B	61	64	Right-handed 310
Helix 4	AA4	B	138	140	Right-handed 310
Helix 5	AA5	B	167	169	Right-handed 310
Helix 6	AA6	B	198	200	Right-handed 310
Helix 7	AA7	C	282	291	Right-handed alpha
Helix 8	AA8	C	325	331	Right-handed alpha
Helix 9	AA9	C	337	341	Right-handed 310
Helix 10	AB1	C	352	356	Right-handed 310
Helix 11	AB2	C	374	377	Right-handed 310
Helix 12	AB3	C	391	398	Right-handed 310
Helix 13	AB4	C	404	410	Right-handed alpha
Helix 14	AB5	C	426	431	Right-handed alpha
Helix 15	AB6	C	489	493	Right-handed 310

There are 17 sheets in PDB entry 9S67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	7	first strand
Strand 2	A	19	25	anti-parallel
Strand 3	A	70	75	anti-parallel
Strand 4	A	62	67	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	12	first strand
Strand 2	A	102	104	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	45	49	anti-parallel
Strand 3	A	34	38	anti-parallel
Strand 4	A	85	90	anti-parallel
Strand 5	A	96	97	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	117	first strand
Strand 2	A	128	138	anti-parallel
Strand 3	A	172	181	anti-parallel
Strand 4	A	158	161	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	149	first strand
Strand 2	A	190	196	anti-parallel
Strand 3	A	204	209	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	8	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	77	82	anti-parallel
Strand 4	B	67	72	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	12	first strand
Strand 2	B	118	122	parallel
Strand 3	B	91	98	anti-parallel
Strand 4	B	33	39	anti-parallel
Strand 5	B	46	50	anti-parallel
Strand 6	B	58	59	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	135	first strand
Strand 2	B	146	156	anti-parallel
Strand 3	B	187	196	anti-parallel
Strand 4	B	174	176	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	143	first strand
Strand 2	B	146	156	anti-parallel
Strand 3	B	187	196	anti-parallel
Strand 4	B	180	181	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	165	first strand
Strand 2	B	205	211	anti-parallel
Strand 3	B	216	222	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	60	first strand
Strand 2	C	259	267	anti-parallel
Strand 3	C	273	278	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	71	first strand
Strand 2	C	252	255	anti-parallel
Strand 3	C	89	94	anti-parallel
Strand 4	C	180	191	anti-parallel
Strand 5	C	194	206	anti-parallel
Strand 6	C	218	223	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	83	first strand
Strand 2	C	231	235	anti-parallel
Strand 3	C	101	105	anti-parallel
Strand 4	C	114	119	anti-parallel
Strand 5	C	124	129	anti-parallel
Strand 6	C	162	165	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	149	first strand
Strand 2	C	139	142	anti-parallel
Strand 3	C	237	238	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	316	first strand
Strand 2	C	526	530	parallel
Strand 3	C	533	541	anti-parallel
Strand 4	C	571	575	anti-parallel
Strand 5	C	560	564	anti-parallel
Strand 6	C	552	554	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	346	first strand
Strand 2	C	379	390	anti-parallel
Strand 3	C	495	503	anti-parallel
Strand 4	C	421	424	anti-parallel
Strand 5	C	362	364	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	346	first strand
Strand 2	C	379	390	anti-parallel
Strand 3	C	511	512	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9S67

Analysis of interatomic Contacts of Structural Units in PDB entry:
9S67