Analysis of interatomic Contacts of Structural Units in PDB entry:
9S6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9S6A entry

There is 1 chain in PDB entry 9S6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 88VAL 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 9S6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 99Right-handed alpha
Helix 2
AA2
A
163 166Right-handed 310
Helix 3
AA3
A
167 174Right-handed alpha
Helix 4
AA4
A
225 236Right-handed alpha
Helix 5
AA5
A
255 261Right-handed alpha
Helix 6
AA6
A
279 289Right-handed alpha
Helix 7
AA7
A
299 304Right-handed 310
Helix 8
AA8
A
315 317Right-handed 310
Helix 9
AA9
A
318 332Right-handed alpha
Helix 10
AB1
A
332 339Right-handed alpha
Helix 11
AB2
A
341 346Right-handed alpha
Helix 12
AB3
A
348 357Right-handed alpha
Helix 13
AB4
A
358 360Right-handed 310
Helix 14
AB5
A
361 380Right-handed alpha
Helix 15
AB6
A
381 386Right-handed alpha
Helix 16
AB7
A
422 437Right-handed alpha
Helix 17
AB8
A
448 452Right-handed 310
Helix 18
AB9
A
468 475Right-handed alpha
Helix 19
AC1
A
484 491Right-handed alpha
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There are 4 sheets in PDB entry 9S6A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 131first strand
Strand 2
A
112 115parallel
Strand 3
A
140 142parallel
Strand 4
A
151 155parallel
Strand 5
A
179 180parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 242first strand
Strand 2
A
213 215parallel
Strand 3
A
265 269parallel
Strand 4
A
291 295parallel
Strand 5
A
311 312parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 393first strand
Strand 2
A
396 405anti-parallel
Strand 3
A
412 417anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 393first strand
Strand 2
A
396 405anti-parallel
Strand 3
A
495 500parallel
Strand 4
A
459 464anti-parallel
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