Analysis of interatomic Contacts of Structural Units in PDB entry:
9S8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9S8E entry

There are 2 chains in PDB entry 9S8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 72GLY 587
B
 SER 72GLY 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 9S8E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 93Right-handed alpha
Helix 2
AA2
A
101 120Right-handed alpha
Helix 3
AA3
A
171 178Right-handed alpha
Helix 4
AA4
A
181 188Right-handed alpha
Helix 5
AA5
A
188 199Right-handed alpha
Helix 6
AA6
A
205 207Right-handed 310
Helix 7
AA7
A
208 242Right-handed alpha
Helix 8
AA8
A
249 261Right-handed alpha
Helix 9
AA9
A
265 276Right-handed alpha
Helix 10
AB1
A
278 306Right-handed alpha
Helix 11
AB2
A
317 353Right-handed alpha
Helix 12
AB3
A
354 357Right-handed 310
Helix 13
AB4
A
358 381Right-handed alpha
Helix 14
AB5
A
383 398Right-handed alpha
Helix 15
AB6
A
399 402Right-handed 310
Helix 16
AB7
A
406 437Right-handed alpha
Helix 17
AB8
A
443 470Right-handed alpha
Helix 18
AB9
A
478 488Right-handed alpha
Helix 19
AC1
A
492 501Right-handed alpha
Helix 20
AC2
A
505 527Right-handed alpha
Helix 21
AC3
A
529 537Right-handed alpha
Helix 22
AC4
A
565 578Right-handed alpha
Helix 23
AC5
A
579 584Right-handed alpha
Helix 24
AC6
B
73 93Right-handed alpha
Helix 25
AC7
B
101 120Right-handed alpha
Helix 26
AC8
B
171 178Right-handed alpha
Helix 27
AC9
B
181 188Right-handed alpha
Helix 28
AD1
B
188 199Right-handed alpha
Helix 29
AD2
B
205 207Right-handed 310
Helix 30
AD3
B
208 242Right-handed alpha
Helix 31
AD4
B
249 261Right-handed alpha
Helix 32
AD5
B
265 276Right-handed alpha
Helix 33
AD6
B
278 306Right-handed alpha
Helix 34
AD7
B
317 353Right-handed alpha
Helix 35
AD8
B
354 357Right-handed 310
Helix 36
AD9
B
358 381Right-handed alpha
Helix 37
AE1
B
383 398Right-handed alpha
Helix 38
AE2
B
399 402Right-handed 310
Helix 39
AE3
B
406 437Right-handed alpha
Helix 40
AE4
B
443 470Right-handed alpha
Helix 41
AE5
B
478 488Right-handed alpha
Helix 42
AE6
B
492 501Right-handed alpha
Helix 43
AE7
B
505 527Right-handed alpha
Helix 44
AE8
B
529 537Right-handed alpha
Helix 45
AE9
B
565 578Right-handed alpha
Helix 46
AF1
B
579 584Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9S8E
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il