Analysis of interatomic Contacts of Structural Units in PDB entry:
9S9C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9S9C entry

There is 1 chain in PDB entry 9S9C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 33ASN 715
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 9S9C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 49Right-handed alpha
Helix 2
AA2
A
56 61Right-handed 310
Helix 3
AA3
A
66 70Right-handed 310
Helix 4
AA4
A
95 100Right-handed 310
Helix 5
AA5
A
120 125Right-handed 310
Helix 6
AA6
A
169 174Right-handed 310
Helix 7
AA7
A
221 227Right-handed 310
Helix 8
AA8
A
245 251Right-handed 310
Helix 9
AA9
A
269 276Right-handed 310
Helix 10
AB1
A
294 300Right-handed 310
Helix 11
AB2
A
318 325Right-handed 310
Helix 12
AB3
A
343 349Right-handed 310
Helix 13
AB4
A
369 374Right-handed alpha
Helix 14
AB5
A
392 398Right-handed 310
Helix 15
AB6
A
416 422Right-handed 310
Helix 16
AB7
A
440 446Right-handed 310
Helix 17
AB8
A
464 470Right-handed 310
Helix 18
AB9
A
488 492Right-handed 310
Helix 19
AC1
A
512 518Right-handed 310
Helix 20
AC2
A
550 554Right-handed 310
Helix 21
AC3
A
607 611Right-handed 310
Helix 22
AC4
A
629 634Right-handed 310
Helix 23
AC5
A
652 658Right-handed 310
Helix 24
AC6
A
676 682Right-handed 310
Helix 25
AC7
A
710 714Right-handed 310
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There are 11 sheets in PDB entry 9S9C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
91 92anti-parallel
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There are 24 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
79 84anti-parallel
Strand 3
A
107 109parallel
Strand 4
A
131 133parallel
Strand 5
A
156 158parallel
Strand 6
A
181 183parallel
Strand 7
A
208 210parallel
Strand 8
A
232 234parallel
Strand 9
A
256 258parallel
Strand 10
A
281 283parallel
Strand 11
A
305 307parallel
Strand 12
A
330 332parallel
Strand 13
A
354 356parallel
Strand 14
A
379 381parallel
Strand 15
A
403 405parallel
Strand 16
A
427 429parallel
Strand 17
A
451 453parallel
Strand 18
A
475 477parallel
Strand 19
A
499 501parallel
Strand 20
A
523 525parallel
Strand 21
A
615 617parallel
Strand 22
A
639 641parallel
Strand 23
A
663 665parallel
Strand 24
A
687 689parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
139 140parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 219first strand
Strand 2
A
239 241parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
288 290parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 341first strand
Strand 2
A
361 363parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
410 411parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 461first strand
Strand 2
A
482 483parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
530 532parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
557 559first strand
Strand 2
A
573 575anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 673first strand
Strand 2
A
694 695parallel
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