Analysis of interatomic Contacts of Structural Units in PDB entry:
9SAO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SAO entry

There are 5 chains in PDB entry 9SAO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
P
 A 13 U 22
T
 A 14 U 28
A
 VAL 31THR 929
B
 ASP 78ALA 191
C
 LYS 2MET 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 9SAO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 91Right-handed alpha
Helix 2
AA2
A
123 133Right-handed alpha
Helix 3
AA3
A
139 149Right-handed alpha
Helix 4
AA4
A
153 157Right-handed 310
Helix 5
AA5
A
170 176Right-handed alpha
Helix 6
AA6
A
178 199Right-handed alpha
Helix 7
AA7
A
206 210Right-handed 310
Helix 8
AA8
A
234 248Right-handed alpha
Helix 9
AA9
A
249 260Right-handed 310
Helix 10
AB1
A
275 287Right-handed alpha
Helix 11
AB2
A
297 301Right-handed 310
Helix 12
AB3
A
303 318Right-handed alpha
Helix 13
AB4
A
367 375Right-handed alpha
Helix 14
AB5
A
377 384Right-handed alpha
Helix 15
AB6
A
416 426Right-handed alpha
Helix 16
AB7
A
446 454Right-handed alpha
Helix 17
AB8
A
455 459Right-handed 310
Helix 18
AB9
A
465 479Right-handed alpha
Helix 19
AC1
A
489 493Right-handed 310
Helix 20
AC2
A
505 509Right-handed 310
Helix 21
AC3
A
511 517Right-handed alpha
Helix 22
AC4
A
520 532Right-handed alpha
Helix 23
AC5
A
561 580Right-handed alpha
Helix 24
AC6
A
596 607Right-handed alpha
Helix 25
AC7
A
621 626Right-handed alpha
Helix 26
AC8
A
627 639Right-handed alpha
Helix 27
AC9
A
647 662Right-handed alpha
Helix 28
AD1
A
686 710Right-handed alpha
Helix 29
AD2
A
717 733Right-handed alpha
Helix 30
AD3
A
738 752Right-handed alpha
Helix 31
AD4
A
767 774Right-handed alpha
Helix 32
AD5
A
778 791Right-handed alpha
Helix 33
AD6
A
833 842Right-handed alpha
Helix 34
AD7
A
846 851Right-handed 310
Helix 35
AD8
A
856 867Right-handed alpha
Helix 36
AD9
A
868 872Right-handed 310
Helix 37
AE1
A
874 896Right-handed alpha
Helix 38
AE2
A
913 917Right-handed alpha
Helix 39
AE3
A
919 924Right-handed alpha
Helix 40
AE4
B
79 94Right-handed alpha
Helix 41
AE5
B
99 107Right-handed alpha
Helix 42
AE6
B
119 125Right-handed alpha
Helix 43
AE7
B
134 142Right-handed alpha
Helix 44
AE8
C
3 20Right-handed alpha
Helix 45
AE9
C
25 41Right-handed alpha
Helix 46
AF1
C
44 61Right-handed alpha
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There are 9 sheets in PDB entry 9SAO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
43 49anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
232 233parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
338 347anti-parallel
Strand 3
A
327 335anti-parallel
Strand 4
A
362 363parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
338 347anti-parallel
Strand 3
A
327 335anti-parallel
Strand 4
B
115 116anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
B
127 132parallel
Strand 3
B
184 190anti-parallel
Strand 4
B
153 161anti-parallel
Strand 5
B
146 148anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 400first strand
Strand 2
A
672 675anti-parallel
Strand 3
A
666 668anti-parallel
Strand 4
A
540 544parallel
Strand 5
A
556 559anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
843 844anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
753 758first strand
Strand 2
A
761 766anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 822first strand
Strand 2
A
825 831anti-parallel
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