Analysis of interatomic Contacts of Structural Units in PDB entry:
9SGQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SGQ entry

There are 2 chains in PDB entry 9SGQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASN 41ARG 740
A
 GLY 24ARG 740
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 9SGQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
44 50Right-handed 310
Helix 2
AA2
B
52 56Right-handed 310
Helix 3
AA3
B
63 68Right-handed alpha
Helix 4
AA4
B
69 71Right-handed 310
Helix 5
AA5
B
72 85Right-handed alpha
Helix 6
AA6
B
93 97Right-handed 310
Helix 7
AA7
B
98 111Right-handed alpha
Helix 8
AA8
B
125 129Right-handed 310
Helix 9
AA9
B
135 139Right-handed 310
Helix 10
AB1
B
140 148Right-handed alpha
Helix 11
AB2
B
148 156Right-handed alpha
Helix 12
AB3
B
157 159Right-handed 310
Helix 13
AB4
B
160 175Right-handed alpha
Helix 14
AB5
B
234 238Right-handed 310
Helix 15
AB6
B
240 254Right-handed alpha
Helix 16
AB7
B
258 272Right-handed alpha
Helix 17
AB8
B
280 284Right-handed 310
Helix 18
AB9
B
292 296Right-handed 310
Helix 19
AC1
B
308 312Right-handed 310
Helix 20
AC2
B
331 339Right-handed alpha
Helix 21
AC3
B
357 359Right-handed 310
Helix 22
AC4
B
382 387Right-handed alpha
Helix 23
AC5
B
387 399Right-handed alpha
Helix 24
AC6
B
400 417Right-handed alpha
Helix 25
AC7
B
422 426Right-handed 310
Helix 26
AC8
B
436 440Right-handed 310
Helix 27
AC9
B
451 464Right-handed alpha
Helix 28
AD1
B
468 481Right-handed alpha
Helix 29
AD2
B
495 498Right-handed 310
Helix 30
AD3
B
499 504Right-handed alpha
Helix 31
AD4
B
512 530Right-handed alpha
Helix 32
AD5
B
539 560Right-handed alpha
Helix 33
AD6
B
575 579Right-handed 310
Helix 34
AD7
B
580 585Right-handed alpha
Helix 35
AD8
B
586 588Right-handed 310
Helix 36
AD9
B
605 617Right-handed alpha
Helix 37
AE1
B
620 634Right-handed alpha
Helix 38
AE2
B
637 641Right-handed 310
Helix 39
AE3
B
655 663Right-handed alpha
Helix 40
AE4
B
692 701Right-handed alpha
Helix 41
AE5
B
701 712Right-handed alpha
Helix 42
AE6
B
713 715Right-handed 310
Helix 43
AE7
B
716 733Right-handed alpha
Helix 44
AE8
A
28 32Right-handed 310
Helix 45
AE9
A
34 38Right-handed 310
Helix 46
AF1
A
44 49Right-handed 310
Helix 47
AF2
A
63 69Right-handed alpha
Helix 48
AF3
A
72 86Right-handed alpha
Helix 49
AF4
A
93 97Right-handed 310
Helix 50
AF5
A
98 111Right-handed alpha
Helix 51
AF6
A
144 156Right-handed alpha
Helix 52
AF7
A
157 159Right-handed 310
Helix 53
AF8
A
160 176Right-handed alpha
Helix 54
AF9
A
242 255Right-handed alpha
Helix 55
AG1
A
258 272Right-handed alpha
Helix 56
AG2
A
330 337Right-handed alpha
Helix 57
AG3
A
379 381Right-handed 310
Helix 58
AG4
A
382 387Right-handed alpha
Helix 59
AG5
A
387 398Right-handed alpha
Helix 60
AG6
A
400 417Right-handed alpha
Helix 61
AG7
A
422 426Right-handed 310
Helix 62
AG8
A
436 440Right-handed 310
Helix 63
AG9
A
454 464Right-handed alpha
Helix 64
AH1
A
468 481Right-handed alpha
Helix 65
AH2
A
495 498Right-handed 310
Helix 66
AH3
A
499 504Right-handed alpha
Helix 67
AH4
A
514 531Right-handed alpha
Helix 68
AH5
A
539 560Right-handed alpha
Helix 69
AH6
A
584 588Right-handed 310
Helix 70
AH7
A
605 617Right-handed alpha
Helix 71
AH8
A
620 634Right-handed alpha
Helix 72
AH9
A
637 641Right-handed 310
Helix 73
AI1
A
655 662Right-handed alpha
Helix 74
AI2
A
693 701Right-handed alpha
Helix 75
AI3
A
701 712Right-handed alpha
Helix 76
AI4
A
716 733Right-handed alpha
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There are 5 sheets in PDB entry 9SGQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 345first strand
Strand 2
B
351 355anti-parallel
Strand 3
B
376 377anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
591 592first strand
Strand 2
B
597 598anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
667 670first strand
Strand 2
B
678 681anti-parallel
Strand 3
B
690 691anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 592first strand
Strand 2
A
597 598anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 670first strand
Strand 2
A
677 681anti-parallel
Strand 3
A
687 692anti-parallel
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