Analysis of interatomic Contacts of Structural Units in PDB entry:
9SGR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SGR entry

There are 2 chains in PDB entry 9SGR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 43ARG 740
B
 ARG 42ARG 740
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 9SGR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 50Right-handed 310
Helix 2
AA2
A
63 69Right-handed alpha
Helix 3
AA3
A
72 86Right-handed alpha
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
98 111Right-handed alpha
Helix 6
AA6
A
145 147Right-handed 310
Helix 7
AA7
A
148 156Right-handed alpha
Helix 8
AA8
A
157 159Right-handed 310
Helix 9
AA9
A
160 176Right-handed alpha
Helix 10
AB1
A
243 255Right-handed alpha
Helix 11
AB2
A
258 272Right-handed alpha
Helix 12
AB3
A
330 337Right-handed alpha
Helix 13
AB4
A
379 381Right-handed 310
Helix 14
AB5
A
382 387Right-handed alpha
Helix 15
AB6
A
387 400Right-handed alpha
Helix 16
AB7
A
400 417Right-handed alpha
Helix 17
AB8
A
422 426Right-handed 310
Helix 18
AB9
A
436 440Right-handed 310
Helix 19
AC1
A
453 464Right-handed alpha
Helix 20
AC2
A
468 481Right-handed alpha
Helix 21
AC3
A
499 504Right-handed alpha
Helix 22
AC4
A
513 531Right-handed alpha
Helix 23
AC5
A
539 560Right-handed alpha
Helix 24
AC6
A
575 579Right-handed 310
Helix 25
AC7
A
580 585Right-handed alpha
Helix 26
AC8
A
586 588Right-handed 310
Helix 27
AC9
A
605 617Right-handed alpha
Helix 28
AD1
A
620 635Right-handed alpha
Helix 29
AD2
A
637 641Right-handed 310
Helix 30
AD3
A
655 662Right-handed alpha
Helix 31
AD4
A
692 701Right-handed alpha
Helix 32
AD5
A
701 713Right-handed alpha
Helix 33
AD6
A
716 733Right-handed alpha
Helix 34
AD7
B
44 49Right-handed 310
Helix 35
AD8
B
63 69Right-handed alpha
Helix 36
AD9
B
72 85Right-handed alpha
Helix 37
AE1
B
93 97Right-handed 310
Helix 38
AE2
B
98 110Right-handed alpha
Helix 39
AE3
B
143 148Right-handed alpha
Helix 40
AE4
B
148 156Right-handed alpha
Helix 41
AE5
B
157 159Right-handed 310
Helix 42
AE6
B
160 176Right-handed alpha
Helix 43
AE7
B
241 254Right-handed alpha
Helix 44
AE8
B
258 272Right-handed alpha
Helix 45
AE9
B
330 337Right-handed alpha
Helix 46
AF1
B
379 387Right-handed alpha
Helix 47
AF2
B
387 400Right-handed alpha
Helix 48
AF3
B
400 417Right-handed alpha
Helix 49
AF4
B
422 426Right-handed 310
Helix 50
AF5
B
436 440Right-handed 310
Helix 51
AF6
B
453 464Right-handed alpha
Helix 52
AF7
B
468 481Right-handed alpha
Helix 53
AF8
B
495 498Right-handed 310
Helix 54
AF9
B
499 504Right-handed alpha
Helix 55
AG1
B
513 530Right-handed alpha
Helix 56
AG2
B
539 560Right-handed alpha
Helix 57
AG3
B
580 585Right-handed alpha
Helix 58
AG4
B
586 588Right-handed 310
Helix 59
AG5
B
593 596Right-handed 310
Helix 60
AG6
B
605 617Right-handed alpha
Helix 61
AG7
B
620 634Right-handed alpha
Helix 62
AG8
B
637 641Right-handed 310
Helix 63
AG9
B
656 662Right-handed alpha
Helix 64
AH1
B
692 701Right-handed alpha
Helix 65
AH2
B
701 712Right-handed alpha
Helix 66
AH3
B
716 733Right-handed alpha
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There are 4 sheets in PDB entry 9SGR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 592first strand
Strand 2
A
597 598anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 670first strand
Strand 2
A
678 681anti-parallel
Strand 3
A
687 691anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
591 592first strand
Strand 2
B
597 598anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
667 670first strand
Strand 2
B
678 681anti-parallel
Strand 3
B
687 691anti-parallel
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