Analysis of interatomic Contacts of Structural Units in PDB entry:
9SGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SGS entry

There are 2 chains in PDB entry 9SGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 41VAL 739
B
 ASN 41VAL 739
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 9SGS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 50Right-handed alpha
Helix 2
AA2
A
63 70Right-handed alpha
Helix 3
AA3
A
72 85Right-handed alpha
Helix 4
AA4
A
98 110Right-handed alpha
Helix 5
AA5
A
142 147Right-handed 310
Helix 6
AA6
A
148 156Right-handed alpha
Helix 7
AA7
A
157 159Right-handed 310
Helix 8
AA8
A
160 176Right-handed alpha
Helix 9
AA9
A
240 254Right-handed alpha
Helix 10
AB1
A
258 272Right-handed alpha
Helix 11
AB2
A
330 337Right-handed alpha
Helix 12
AB3
A
379 386Right-handed alpha
Helix 13
AB4
A
387 400Right-handed alpha
Helix 14
AB5
A
400 418Right-handed alpha
Helix 15
AB6
A
419 421Right-handed 310
Helix 16
AB7
A
422 426Right-handed 310
Helix 17
AB8
A
436 440Right-handed 310
Helix 18
AB9
A
453 464Right-handed alpha
Helix 19
AC1
A
468 481Right-handed alpha
Helix 20
AC2
A
495 498Right-handed 310
Helix 21
AC3
A
499 504Right-handed alpha
Helix 22
AC4
A
512 531Right-handed alpha
Helix 23
AC5
A
539 560Right-handed alpha
Helix 24
AC6
A
581 585Right-handed 310
Helix 25
AC7
A
593 596Right-handed 310
Helix 26
AC8
A
605 617Right-handed alpha
Helix 27
AC9
A
620 634Right-handed alpha
Helix 28
AD1
A
655 662Right-handed alpha
Helix 29
AD2
A
692 701Right-handed alpha
Helix 30
AD3
A
701 712Right-handed alpha
Helix 31
AD4
A
716 733Right-handed alpha
Helix 32
AD5
B
44 48Right-handed 310
Helix 33
AD6
B
63 69Right-handed alpha
Helix 34
AD7
B
72 85Right-handed alpha
Helix 35
AD8
B
93 97Right-handed 310
Helix 36
AD9
B
98 111Right-handed alpha
Helix 37
AE1
B
142 147Right-handed 310
Helix 38
AE2
B
148 153Right-handed alpha
Helix 39
AE3
B
154 159Right-handed 310
Helix 40
AE4
B
160 175Right-handed alpha
Helix 41
AE5
B
240 254Right-handed alpha
Helix 42
AE6
B
258 273Right-handed alpha
Helix 43
AE7
B
330 337Right-handed alpha
Helix 44
AE8
B
382 387Right-handed alpha
Helix 45
AE9
B
387 400Right-handed alpha
Helix 46
AF1
B
400 417Right-handed alpha
Helix 47
AF2
B
422 426Right-handed 310
Helix 48
AF3
B
436 440Right-handed 310
Helix 49
AF4
B
454 464Right-handed alpha
Helix 50
AF5
B
468 481Right-handed alpha
Helix 51
AF6
B
495 498Right-handed 310
Helix 52
AF7
B
499 504Right-handed alpha
Helix 53
AF8
B
515 531Right-handed alpha
Helix 54
AF9
B
539 559Right-handed alpha
Helix 55
AG1
B
580 586Right-handed alpha
Helix 56
AG2
B
593 596Right-handed 310
Helix 57
AG3
B
605 617Right-handed alpha
Helix 58
AG4
B
620 634Right-handed alpha
Helix 59
AG5
B
637 641Right-handed 310
Helix 60
AG6
B
655 662Right-handed alpha
Helix 61
AG7
B
692 698Right-handed alpha
Helix 62
AG8
B
701 712Right-handed alpha
Helix 63
AG9
B
716 733Right-handed alpha
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There are 6 sheets in PDB entry 9SGS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 344first strand
Strand 2
A
352 354anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 592first strand
Strand 2
A
597 598anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 670first strand
Strand 2
A
678 681anti-parallel
Strand 3
A
687 691anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
342 343first strand
Strand 2
B
353 354anti-parallel
Strand 3
B
376 377anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
591 592first strand
Strand 2
B
597 598anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
667 670first strand
Strand 2
B
678 681anti-parallel
Strand 3
B
687 691anti-parallel
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