Analysis of interatomic Contacts of Structural Units in PDB entry:
9SH0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9SH0 entry

There is 1 chain in PDB entry 9SH0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ARG 251	ARG 1722

There are 26 helices in PDB entry 9SH0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	322	328	Right-handed alpha
Helix 2	AA2	D	355	360	Right-handed alpha
Helix 3	AA3	D	414	418	Right-handed 310
Helix 4	AA4	D	566	571	Right-handed alpha
Helix 5	AA5	D	614	619	Right-handed 310
Helix 6	AA6	D	736	765	Right-handed alpha
Helix 7	AA7	D	769	792	Right-handed alpha
Helix 8	AA8	D	802	830	Right-handed alpha
Helix 9	AA9	D	834	854	Right-handed alpha
Helix 10	AB1	D	880	884	Right-handed 310
Helix 11	AB2	D	908	917	Right-handed 310
Helix 12	AB3	D	952	956	Right-handed 310
Helix 13	AB4	D	1035	1039	Right-handed 310
Helix 14	AB5	D	1115	1119	Right-handed 310
Helix 15	AB6	D	1161	1165	Right-handed 310
Helix 16	AB7	D	1209	1213	Right-handed 310
Helix 17	AB8	D	1225	1227	Right-handed 310
Helix 18	AB9	D	1324	1343	Right-handed alpha
Helix 19	AC1	D	1409	1414	Right-handed alpha
Helix 20	AC2	D	1415	1418	Right-handed 310
Helix 21	AC3	D	1460	1470	Right-handed alpha
Helix 22	AC4	D	1524	1527	Right-handed 310
Helix 23	AC5	D	1574	1580	Right-handed alpha
Helix 24	AC6	D	1606	1618	Right-handed alpha
Helix 25	AC7	D	1655	1665	Right-handed alpha
Helix 26	AC8	D	1666	1669	Right-handed 310

There are 19 sheets in PDB entry 9SH0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	310	321	first strand
Strand 2	D	266	276	anti-parallel
Strand 3	D	383	394	anti-parallel
Strand 4	D	365	374	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	296	299	first strand
Strand 2	D	287	293	anti-parallel
Strand 3	D	330	337	anti-parallel
Strand 4	D	346	354	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	500	502	first strand
Strand 2	D	429	432	anti-parallel
Strand 3	D	590	591	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	545	555	first strand
Strand 2	D	578	588	anti-parallel
Strand 3	D	434	441	anti-parallel
Strand 4	D	491	497	anti-parallel
Strand 5	D	606	609	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	477	480	first strand
Strand 2	D	468	474	anti-parallel
Strand 3	D	508	515	anti-parallel
Strand 4	D	522	530	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	708	709	first strand
Strand 2	D	714	716	anti-parallel
Strand 3	D	620	637	anti-parallel
Strand 4	D	923	932	anti-parallel
Strand 5	D	900	904	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	708	709	first strand
Strand 2	D	714	716	anti-parallel
Strand 3	D	620	637	anti-parallel
Strand 4	D	722	734	anti-parallel
Strand 5	D	965	968	anti-parallel
Strand 6	D	947	950	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	646	651	first strand
Strand 2	D	863	869	anti-parallel
Strand 3	D	872	879	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1023	1032	first strand
Strand 2	D	972	984	anti-parallel
Strand 3	D	1107	1110	anti-parallel
Strand 4	D	1070	1072	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1023	1032	first strand
Strand 2	D	972	984	anti-parallel
Strand 3	D	1098	1104	anti-parallel
Strand 4	D	1088	1093	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1006	1009	first strand
Strand 2	D	997	1003	anti-parallel
Strand 3	D	1046	1052	anti-parallel
Strand 4	D	1060	1067	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1200	1207	first strand
Strand 2	D	1144	1157	anti-parallel
Strand 3	D	1444	1456	anti-parallel
Strand 4	D	1422	1427	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1179	1182	first strand
Strand 2	D	1170	1176	anti-parallel
Strand 3	D	1217	1223	anti-parallel
Strand 4	D	1229	1235	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1404	1406	first strand
Strand 2	D	1680	1682	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1539	1546	first strand
Strand 2	D	1485	1497	anti-parallel
Strand 3	D	1698	1707	anti-parallel
Strand 4	D	1684	1685	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1519	1522	first strand
Strand 2	D	1510	1516	anti-parallel
Strand 3	D	1552	1558	anti-parallel
Strand 4	D	1566	1569	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1595	1596	first strand
Strand 2	D	1599	1600	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1624	1625	first strand
Strand 2	D	1630	1633	anti-parallel
Strand 3	D	1636	1639	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1643	1645	first strand
Strand 2	D	1651	1653	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9SH0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9SH0