Analysis of interatomic Contacts of Structural Units in PDB entry:
9SH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SH9 entry

There are 2 chains in PDB entry 9SH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 438
B
 MET 1PRO 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9SH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 11Right-handed 310
Helix 2
AA2
A
53 62Right-handed alpha
Helix 3
AA3
A
81 84Right-handed 310
Helix 4
AA4
A
110 117Right-handed alpha
Helix 5
AA5
A
117 122Right-handed alpha
Helix 6
AA6
A
124 148Right-handed alpha
Helix 7
AA7
A
186 198Right-handed alpha
Helix 8
AA8
A
232 255Right-handed alpha
Helix 9
AA9
A
255 262Right-handed alpha
Helix 10
AB1
A
265 274Right-handed alpha
Helix 11
AB2
A
282 296Right-handed alpha
Helix 12
AB3
A
309 318Right-handed alpha
Helix 13
AB4
A
330 334Right-handed 310
Helix 14
AB5
A
371 382Right-handed alpha
Helix 15
AB6
A
389 398Right-handed alpha
Helix 16
AB7
A
410 419Right-handed alpha
Helix 17
AB8
A
422 427Right-handed 310
Helix 18
AB9
B
4 11Right-handed 310
Helix 19
AC1
B
53 62Right-handed alpha
Helix 20
AC2
B
81 84Right-handed 310
Helix 21
AC3
B
110 117Right-handed alpha
Helix 22
AC4
B
117 122Right-handed alpha
Helix 23
AC5
B
124 148Right-handed alpha
Helix 24
AC6
B
186 198Right-handed alpha
Helix 25
AC7
B
232 255Right-handed alpha
Helix 26
AC8
B
255 262Right-handed alpha
Helix 27
AC9
B
265 274Right-handed alpha
Helix 28
AD1
B
282 296Right-handed alpha
Helix 29
AD2
B
309 318Right-handed alpha
Helix 30
AD3
B
330 334Right-handed 310
Helix 31
AD4
B
371 382Right-handed alpha
Helix 32
AD5
B
389 398Right-handed alpha
Helix 33
AD6
B
410 419Right-handed alpha
Helix 34
AD7
B
422 427Right-handed 310
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There are 5 sheets in PDB entry 9SH9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 27first strand
Strand 2
A
31 37anti-parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
86 96parallel
Strand 5
A
68 76anti-parallel
Strand 6
A
15 27anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
199 207parallel
Strand 3
A
220 229anti-parallel
Strand 4
A
403 409anti-parallel
Strand 5
A
360 368anti-parallel
Strand 6
A
350 355anti-parallel
Strand 7
A
324 327anti-parallel
Strand 8
A
279 281parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 159first strand
Strand 2
A
179 182anti-parallel
Strand 3
A
171 173anti-parallel
Strand 4
B
171 173anti-parallel
Strand 5
B
179 182anti-parallel
Strand 6
B
158 159anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 27first strand
Strand 2
B
31 37anti-parallel
Strand 3
B
42 48anti-parallel
Strand 4
B
86 96parallel
Strand 5
B
68 76anti-parallel
Strand 6
B
15 27anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 152first strand
Strand 2
B
199 207parallel
Strand 3
B
220 229anti-parallel
Strand 4
B
403 409anti-parallel
Strand 5
B
360 368anti-parallel
Strand 6
B
350 355anti-parallel
Strand 7
B
324 327anti-parallel
Strand 8
B
279 281parallel
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