Analysis of interatomic Contacts of Structural Units in PDB entry:
9SHL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9SHL entry

There are 7 chains in PDB entry 9SHL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 1	LYS 527
B	GLY 1	LYS 527
C	GLY 1	LYS 527
D	GLY 1	LYS 527
E	GLY 1	LYS 527
F	GLY 1	LYS 527
G	GLY 1	LYS 527

There are150 helices in PDB entry 9SHL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	29	Right-handed alpha
Helix 2	AA2	A	52	59	Right-handed alpha
Helix 3	AA3	A	64	85	Right-handed alpha
Helix 4	AA4	A	88	106	Right-handed alpha
Helix 5	AA5	A	112	135	Right-handed alpha
Helix 6	AA6	A	140	152	Right-handed alpha
Helix 7	AA7	A	155	169	Right-handed alpha
Helix 8	AA8	A	201	205	Right-handed 310
Helix 9	AA9	A	229	243	Right-handed alpha
Helix 10	AB1	A	257	268	Right-handed alpha
Helix 11	AB2	A	282	297	Right-handed alpha
Helix 12	AB3	A	314	318	Right-handed 310
Helix 13	AB4	A	339	355	Right-handed alpha
Helix 14	AB5	A	361	375	Right-handed alpha
Helix 15	AB6	A	386	411	Right-handed alpha
Helix 16	AB7	A	417	422	Right-handed alpha
Helix 17	AB8	A	423	428	Right-handed alpha
Helix 18	AB9	A	434	448	Right-handed alpha
Helix 19	AC1	A	449	459	Right-handed alpha
Helix 20	AC2	A	462	473	Right-handed alpha
Helix 21	AC3	A	498	516	Right-handed alpha
Helix 22	AC4	B	9	29	Right-handed alpha
Helix 23	AC5	B	52	59	Right-handed alpha
Helix 24	AC6	B	64	85	Right-handed alpha
Helix 25	AC7	B	88	106	Right-handed alpha
Helix 26	AC8	B	112	135	Right-handed alpha
Helix 27	AC9	B	140	151	Right-handed alpha
Helix 28	AD1	B	155	169	Right-handed alpha
Helix 29	AD2	B	201	205	Right-handed 310
Helix 30	AD3	B	229	242	Right-handed alpha
Helix 31	AD4	B	257	268	Right-handed alpha
Helix 32	AD5	B	282	297	Right-handed alpha
Helix 33	AD6	B	314	318	Right-handed 310
Helix 34	AD7	B	339	355	Right-handed alpha
Helix 35	AD8	B	362	375	Right-handed alpha
Helix 36	AD9	B	386	411	Right-handed alpha
Helix 37	AE1	B	417	422	Right-handed alpha
Helix 38	AE2	B	423	428	Right-handed alpha
Helix 39	AE3	B	434	448	Right-handed alpha
Helix 40	AE4	B	449	459	Right-handed alpha
Helix 41	AE5	B	462	472	Right-handed alpha
Helix 42	AE6	B	498	516	Right-handed alpha
Helix 43	AE7	C	9	29	Right-handed alpha
Helix 44	AE8	C	52	59	Right-handed alpha
Helix 45	AE9	C	64	85	Right-handed alpha
Helix 46	AF1	C	88	106	Right-handed alpha
Helix 47	AF2	C	112	135	Right-handed alpha
Helix 48	AF3	C	140	152	Right-handed alpha
Helix 49	AF4	C	155	169	Right-handed alpha
Helix 50	AF5	C	201	205	Right-handed 310
Helix 51	AF6	C	229	243	Right-handed alpha
Helix 52	AF7	C	257	268	Right-handed alpha
Helix 53	AF8	C	282	297	Right-handed alpha
Helix 54	AF9	C	314	318	Right-handed 310
Helix 55	AG1	C	339	355	Right-handed alpha
Helix 56	AG2	C	361	373	Right-handed alpha
Helix 57	AG3	C	386	411	Right-handed alpha
Helix 58	AG4	C	417	422	Right-handed alpha
Helix 59	AG5	C	423	428	Right-handed alpha
Helix 60	AG6	C	434	448	Right-handed alpha
Helix 61	AG7	C	449	459	Right-handed alpha
Helix 62	AG8	C	462	473	Right-handed alpha
Helix 63	AG9	C	498	516	Right-handed alpha
Helix 64	AH1	D	9	29	Right-handed alpha
Helix 65	AH2	D	52	59	Right-handed alpha
Helix 66	AH3	D	64	85	Right-handed alpha
Helix 67	AH4	D	88	105	Right-handed alpha
Helix 68	AH5	D	112	135	Right-handed alpha
Helix 69	AH6	D	140	152	Right-handed alpha
Helix 70	AH7	D	155	170	Right-handed alpha
Helix 71	AH8	D	201	205	Right-handed 310
Helix 72	AH9	D	229	244	Right-handed alpha
Helix 73	AI1	D	256	268	Right-handed alpha
Helix 74	AI2	D	282	297	Right-handed alpha
Helix 75	AI3	D	314	318	Right-handed 310
Helix 76	AI4	D	339	355	Right-handed alpha
Helix 77	AI5	D	361	375	Right-handed alpha
Helix 78	AI6	D	386	411	Right-handed alpha
Helix 79	AI7	D	417	422	Right-handed alpha
Helix 80	AI8	D	423	428	Right-handed alpha
Helix 81	AI9	D	434	448	Right-handed alpha
Helix 82	AJ1	D	449	459	Right-handed alpha
Helix 83	AJ2	D	462	473	Right-handed alpha
Helix 84	AJ3	D	489	493	Right-handed alpha
Helix 85	AJ4	D	498	517	Right-handed alpha
Helix 86	AJ5	E	9	29	Right-handed alpha
Helix 87	AJ6	E	52	59	Right-handed alpha
Helix 88	AJ7	E	64	85	Right-handed alpha
Helix 89	AJ8	E	88	106	Right-handed alpha
Helix 90	AJ9	E	112	135	Right-handed alpha
Helix 91	AK1	E	140	152	Right-handed alpha
Helix 92	AK2	E	155	169	Right-handed alpha
Helix 93	AK3	E	201	205	Right-handed 310
Helix 94	AK4	E	229	243	Right-handed alpha
Helix 95	AK5	E	257	268	Right-handed alpha
Helix 96	AK6	E	282	297	Right-handed alpha
Helix 97	AK7	E	314	318	Right-handed 310
Helix 98	AK8	E	339	355	Right-handed alpha
Helix 99	AK9	E	361	374	Right-handed alpha
Helix 100	AL1	E	386	410	Right-handed alpha
Helix 101	AL2	E	417	422	Right-handed alpha
Helix 102	AL3	E	423	429	Right-handed alpha
Helix 103	AL4	E	434	448	Right-handed alpha
Helix 104	AL5	E	449	459	Right-handed alpha
Helix 105	AL6	E	462	473	Right-handed alpha
Helix 106	AL7	E	489	493	Right-handed alpha
Helix 107	AL8	E	498	516	Right-handed alpha
Helix 108	AL9	F	9	29	Right-handed alpha
Helix 109	AM1	F	52	59	Right-handed alpha
Helix 110	AM2	F	64	85	Right-handed alpha
Helix 111	AM3	F	88	105	Right-handed alpha
Helix 112	AM4	F	112	135	Right-handed alpha
Helix 113	AM5	F	140	152	Right-handed alpha
Helix 114	AM6	F	155	169	Right-handed alpha
Helix 115	AM7	F	201	205	Right-handed 310
Helix 116	AM8	F	229	244	Right-handed alpha
Helix 117	AM9	F	257	268	Right-handed alpha
Helix 118	AN1	F	282	297	Right-handed alpha
Helix 119	AN2	F	314	318	Right-handed 310
Helix 120	AN3	F	339	355	Right-handed alpha
Helix 121	AN4	F	361	375	Right-handed alpha
Helix 122	AN5	F	386	411	Right-handed alpha
Helix 123	AN6	F	417	422	Right-handed alpha
Helix 124	AN7	F	423	428	Right-handed alpha
Helix 125	AN8	F	434	448	Right-handed alpha
Helix 126	AN9	F	449	459	Right-handed alpha
Helix 127	AO1	F	462	473	Right-handed alpha
Helix 128	AO2	F	489	493	Right-handed alpha
Helix 129	AO3	F	498	516	Right-handed alpha
Helix 130	AO4	G	9	29	Right-handed alpha
Helix 131	AO5	G	52	59	Right-handed alpha
Helix 132	AO6	G	64	85	Right-handed alpha
Helix 133	AO7	G	88	105	Right-handed alpha
Helix 134	AO8	G	112	135	Right-handed alpha
Helix 135	AO9	G	140	152	Right-handed alpha
Helix 136	AP1	G	155	169	Right-handed alpha
Helix 137	AP2	G	201	205	Right-handed 310
Helix 138	AP3	G	229	243	Right-handed alpha
Helix 139	AP4	G	257	268	Right-handed alpha
Helix 140	AP5	G	282	297	Right-handed alpha
Helix 141	AP6	G	314	318	Right-handed 310
Helix 142	AP7	G	339	355	Right-handed alpha
Helix 143	AP8	G	361	375	Right-handed alpha
Helix 144	AP9	G	386	410	Right-handed alpha
Helix 145	AQ1	G	417	422	Right-handed alpha
Helix 146	AQ2	G	423	428	Right-handed alpha
Helix 147	AQ3	G	434	448	Right-handed alpha
Helix 148	AQ4	G	449	459	Right-handed alpha
Helix 149	AQ5	G	462	472	Right-handed alpha
Helix 150	AQ6	G	498	517	Right-handed alpha

There are 44 sheets in PDB entry 9SHL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	8	first strand
Strand 2	A	518	524	anti-parallel
Strand 3	B	37	40	parallel
Strand 4	B	48	50	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	37	40	anti-parallel
Strand 3	G	518	524	parallel
Strand 4	G	4	8	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	179	first strand
Strand 2	A	377	382	parallel
Strand 3	A	186	190	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	195	first strand
Strand 2	A	331	334	anti-parallel
Strand 3	A	323	326	anti-parallel
Strand 4	A	213	216	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	277	first strand
Strand 2	A	247	251	parallel
Strand 3	A	219	223	parallel
Strand 4	A	300	301	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	277	first strand
Strand 2	A	247	251	parallel
Strand 3	A	219	223	parallel
Strand 4	A	319	320	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	412	414	first strand
Strand 2	A	495	497	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	477	480	first strand
Strand 2	A	485	488	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	8	first strand
Strand 2	B	518	524	anti-parallel
Strand 3	C	37	40	parallel
Strand 4	C	48	50	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	179	first strand
Strand 2	B	377	382	parallel
Strand 3	B	186	190	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	195	first strand
Strand 2	B	331	334	anti-parallel
Strand 3	B	319	326	anti-parallel
Strand 4	B	213	223	anti-parallel
Strand 5	B	247	251	parallel
Strand 6	B	273	277	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	195	first strand
Strand 2	B	331	334	anti-parallel
Strand 3	B	319	326	anti-parallel
Strand 4	B	213	223	anti-parallel
Strand 5	B	300	301	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	412	414	first strand
Strand 2	B	495	497	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	477	480	first strand
Strand 2	B	485	488	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	8	first strand
Strand 2	C	518	524	anti-parallel
Strand 3	D	37	40	parallel
Strand 4	D	48	50	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	179	first strand
Strand 2	C	377	382	parallel
Strand 3	C	186	190	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	195	first strand
Strand 2	C	331	334	anti-parallel
Strand 3	C	319	326	anti-parallel
Strand 4	C	213	223	anti-parallel
Strand 5	C	247	251	parallel
Strand 6	C	273	277	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	195	first strand
Strand 2	C	331	334	anti-parallel
Strand 3	C	319	326	anti-parallel
Strand 4	C	213	223	anti-parallel
Strand 5	C	300	301	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	412	414	first strand
Strand 2	C	495	497	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	477	480	first strand
Strand 2	C	485	488	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	8	first strand
Strand 2	D	518	524	anti-parallel
Strand 3	E	37	40	parallel
Strand 4	E	48	50	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	175	178	first strand
Strand 2	D	377	381	parallel
Strand 3	D	186	190	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	195	first strand
Strand 2	D	331	334	anti-parallel
Strand 3	D	319	326	anti-parallel
Strand 4	D	213	223	anti-parallel
Strand 5	D	247	251	parallel
Strand 6	D	273	277	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	195	first strand
Strand 2	D	331	334	anti-parallel
Strand 3	D	319	326	anti-parallel
Strand 4	D	213	223	anti-parallel
Strand 5	D	300	301	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	412	414	first strand
Strand 2	D	495	497	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	477	480	first strand
Strand 2	D	485	488	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	8	first strand
Strand 2	E	518	524	anti-parallel
Strand 3	F	37	40	parallel
Strand 4	F	48	50	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	175	178	first strand
Strand 2	E	377	381	parallel
Strand 3	E	186	190	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	195	first strand
Strand 2	E	331	334	anti-parallel
Strand 3	E	319	326	anti-parallel
Strand 4	E	213	223	anti-parallel
Strand 5	E	247	251	parallel
Strand 6	E	273	277	parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	195	first strand
Strand 2	E	331	334	anti-parallel
Strand 3	E	319	326	anti-parallel
Strand 4	E	213	223	anti-parallel
Strand 5	E	300	301	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	412	414	first strand
Strand 2	E	495	497	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	477	480	first strand
Strand 2	E	485	488	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	8	first strand
Strand 2	F	518	524	anti-parallel
Strand 3	G	37	40	parallel
Strand 4	G	48	50	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	175	179	first strand
Strand 2	F	377	382	parallel
Strand 3	F	186	190	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	195	first strand
Strand 2	F	331	334	anti-parallel
Strand 3	F	319	326	anti-parallel
Strand 4	F	213	223	anti-parallel
Strand 5	F	247	251	parallel
Strand 6	F	273	277	parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	192	195	first strand
Strand 2	F	331	334	anti-parallel
Strand 3	F	319	326	anti-parallel
Strand 4	F	213	223	anti-parallel
Strand 5	F	300	301	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	412	414	first strand
Strand 2	F	495	497	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	477	480	first strand
Strand 2	F	485	488	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	175	179	first strand
Strand 2	G	377	382	parallel
Strand 3	G	186	190	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	192	195	first strand
Strand 2	G	331	334	anti-parallel
Strand 3	G	323	326	anti-parallel
Strand 4	G	213	216	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	273	277	first strand
Strand 2	G	247	251	parallel
Strand 3	G	219	223	parallel
Strand 4	G	300	301	parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	273	277	first strand
Strand 2	G	247	251	parallel
Strand 3	G	219	223	parallel
Strand 4	G	319	320	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	412	414	first strand
Strand 2	G	495	497	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	477	480	first strand
Strand 2	G	485	488	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9SHL

Analysis of interatomic Contacts of Structural Units in PDB entry:
9SHL