Analysis of interatomic Contacts of Structural Units in PDB entry:
9SN0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SN0 entry

There is 1 chain in PDB entry 9SN0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 560ALA 863
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9SN0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
562 568Right-handed alpha
Helix 2
AA2
A
571 575Right-handed 310
Helix 3
AA3
A
616 632Right-handed alpha
Helix 4
AA4
A
662 670Right-handed alpha
Helix 5
AA5
A
698 719Right-handed alpha
Helix 6
AA6
A
727 729Right-handed 310
Helix 7
AA7
A
735 737Right-handed 310
Helix 8
AA8
A
746 751Right-handed alpha
Helix 9
AA9
A
752 755Right-handed 310
Helix 10
AB1
A
765 769Right-handed 310
Helix 11
AB2
A
770 777Right-handed alpha
Helix 12
AB3
A
780 796Right-handed alpha
Helix 13
AB4
A
807 817Right-handed alpha
Helix 14
AB5
A
828 839Right-handed alpha
Helix 15
AB6
A
842 846Right-handed 310
Helix 16
AB7
A
848 863Right-handed alpha
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There are 2 sheets in PDB entry 9SN0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
576 583first strand
Strand 2
A
588 595anti-parallel
Strand 3
A
603 610anti-parallel
Strand 4
A
652 656anti-parallel
Strand 5
A
641 645anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
731 733first strand
Strand 2
A
739 741anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il