Analysis of interatomic Contacts of Structural Units in PDB entry:
9SNF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SNF entry

There are 2 chains in PDB entry 9SNF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1GLN 146
B
 GLU 2GLN 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 9SNF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
20 32Right-handed alpha
Helix 3
AA3
A
35 38Right-handed 310
Helix 4
AA4
A
39 56Right-handed alpha
Helix 5
AA5
A
73 96Right-handed alpha
Helix 6
AA6
A
98 111Right-handed alpha
Helix 7
AA7
A
112 114Right-handed 310
Helix 8
AA8
A
116 120Right-handed 310
Helix 9
AA9
A
122 130Right-handed 310
Helix 10
AB1
A
131 146Right-handed alpha
Helix 11
AB2
B
3 18Right-handed alpha
Helix 12
AB3
B
20 32Right-handed alpha
Helix 13
AB4
B
35 38Right-handed 310
Helix 14
AB5
B
39 57Right-handed alpha
Helix 15
AB6
B
70 96Right-handed alpha
Helix 16
AB7
B
98 111Right-handed alpha
Helix 17
AB8
B
112 114Right-handed 310
Helix 18
AB9
B
116 120Right-handed 310
Helix 19
AC1
B
122 130Right-handed 310
Helix 20
AC2
B
131 146Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9SNF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il