Analysis of interatomic Contacts of Structural Units in PDB entry:
9SNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SNH entry

There are 4 chains in PDB entry 9SNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 158GLN 279
B
GLY 154GLN 279
C
GLY 154GLN 279
D
GLY 154GLN 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 9SNH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
162 172Right-handed alpha
Helix 2
AA2
A
175 185Right-handed alpha
Helix 3
AA3
A
185 192Right-handed alpha
Helix 4
AA4
A
195 211Right-handed alpha
Helix 5
AA5
A
213 225Right-handed alpha
Helix 6
AA6
A
230 241Right-handed alpha
Helix 7
AA7
A
242 245Right-handed 310
Helix 8
AA8
A
253 259Right-handed alpha
Helix 9
AA9
A
261 278Right-handed alpha
Helix 10
AB1
B
156 161Right-handed 310
Helix 11
AB2
B
162 172Right-handed alpha
Helix 12
AB3
B
175 185Right-handed alpha
Helix 13
AB4
B
185 192Right-handed alpha
Helix 14
AB5
B
195 211Right-handed alpha
Helix 15
AB6
B
213 225Right-handed alpha
Helix 16
AB7
B
230 241Right-handed alpha
Helix 17
AB8
B
242 245Right-handed 310
Helix 18
AB9
B
253 258Right-handed alpha
Helix 19
AC1
B
261 278Right-handed alpha
Helix 20
AC2
C
156 172Right-handed alpha
Helix 21
AC3
C
175 185Right-handed alpha
Helix 22
AC4
C
185 192Right-handed alpha
Helix 23
AC5
C
195 211Right-handed alpha
Helix 24
AC6
C
213 225Right-handed alpha
Helix 25
AC7
C
229 240Right-handed alpha
Helix 26
AC8
C
241 245Right-handed 310
Helix 27
AC9
C
253 258Right-handed alpha
Helix 28
AD1
C
261 277Right-handed alpha
Helix 29
AD2
D
156 172Right-handed alpha
Helix 30
AD3
D
175 185Right-handed alpha
Helix 31
AD4
D
185 192Right-handed alpha
Helix 32
AD5
D
195 211Right-handed alpha
Helix 33
AD6
D
213 225Right-handed alpha
Helix 34
AD7
D
229 240Right-handed alpha
Helix 35
AD8
D
241 245Right-handed 310
Helix 36
AD9
D
253 259Right-handed alpha
Helix 37
AE1
D
260 277Right-handed alpha
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There are no sheets in PDB entry 9SNH

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