Analysis of interatomic Contacts of Structural Units in PDB entry:
9SOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SOY entry

There are 2 chains in PDB entry 9SOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 46VAL 277
B
 ASP 48ARG 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 9SOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 73Right-handed alpha
Helix 2
AA2
A
75 96Right-handed alpha
Helix 3
AA3
A
102 162Right-handed alpha
Helix 4
AA4
A
163 190Right-handed alpha
Helix 5
AA5
A
192 213Right-handed alpha
Helix 6
AA6
A
214 217Right-handed 310
Helix 7
AA7
A
218 220Right-handed 310
Helix 8
AA8
A
221 277Right-handed alpha
Helix 9
AA9
B
49 73Right-handed alpha
Helix 10
AB1
B
75 96Right-handed alpha
Helix 11
AB2
B
102 162Right-handed alpha
Helix 12
AB3
B
163 191Right-handed alpha
Helix 13
AB4
B
192 213Right-handed alpha
Helix 14
AB5
B
214 217Right-handed 310
Helix 15
AB6
B
218 220Right-handed 310
Helix 16
AB7
B
221 276Right-handed alpha
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There are no sheets in PDB entry 9SOY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il