Analysis of interatomic Contacts of Structural Units in PDB entry:
9SR9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SR9 entry

There is 1 chain in PDB entry 9SR9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 VAL 2LYS 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9SR9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
22 33Right-handed alpha
Helix 2
AA2
H
51 62Right-handed alpha
Helix 3
AA3
H
68 73Right-handed alpha
Helix 4
AA4
H
84 96Right-handed alpha
Helix 5
AA5
H
115 124Right-handed alpha
Helix 6
AA6
H
125 130Right-handed 310
Helix 7
AA7
H
131 136Right-handed alpha
Helix 8
AA8
H
148 160Right-handed alpha
Helix 9
AA9
H
179 187Right-handed alpha
Helix 10
AB1
H
209 213Right-handed 310
Helix 11
AB2
H
226 238Right-handed alpha
Helix 12
AB3
H
257 267Right-handed alpha
Helix 13
AB4
H
282 285Right-handed 310
Helix 14
AB5
H
286 309Right-handed alpha
Helix 15
AB6
H
352 377Right-handed alpha
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There are 5 sheets in PDB entry 9SR9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
15 18first strand
Strand 2
H
38 41parallel
Strand 3
H
46 50anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
99 102first strand
Strand 2
H
111 114anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
163 167first strand
Strand 2
H
173 178anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
220 221first strand
Strand 2
H
241 245parallel
Strand 3
H
251 256anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
274 280first strand
Strand 2
H
312 325parallel
Strand 3
H
328 339anti-parallel
Strand 4
H
342 351anti-parallel
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