Analysis of interatomic Contacts of Structural Units in PDB entry:
9SWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SWO entry

There are 2 chains in PDB entry 9SWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 G 116 C 1078
A
 MET 1ASN 884
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9SWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 11Right-handed alpha
Helix 2
AA2
A
20 29Right-handed alpha
Helix 3
AA3
A
33 40Right-handed alpha
Helix 4
AA4
A
60 76Right-handed alpha
Helix 5
AA5
A
80 84Right-handed 310
Helix 6
AA6
A
105 111Right-handed alpha
Helix 7
AA7
A
112 123Right-handed alpha
Helix 8
AA8
A
123 133Right-handed alpha
Helix 9
AA9
A
150 154Right-handed 310
Helix 10
AB1
A
159 164Right-handed alpha
Helix 11
AB2
A
172 177Right-handed alpha
Helix 12
AB3
A
178 180Right-handed 310
Helix 13
AB4
A
185 188Right-handed 310
Helix 14
AB5
A
200 204Right-handed 310
Helix 15
AB6
A
213 222Right-handed alpha
Helix 16
AB7
A
233 249Right-handed alpha
Helix 17
AB8
A
252 261Right-handed alpha
Helix 18
AB9
A
272 277Right-handed 310
Helix 19
AC1
A
279 295Right-handed alpha
Helix 20
AC2
A
302 318Right-handed alpha
Helix 21
AC3
A
327 332Right-handed alpha
Helix 22
AC4
A
339 343Right-handed 310
Helix 23
AC5
A
350 371Right-handed alpha
Helix 24
AC6
A
371 380Right-handed alpha
Helix 25
AC7
A
397 415Right-handed alpha
Helix 26
AC8
A
460 474Right-handed alpha
Helix 27
AC9
A
474 489Right-handed alpha
Helix 28
AD1
A
498 500Right-handed 310
Helix 29
AD2
A
501 517Right-handed alpha
Helix 30
AD3
A
533 538Right-handed alpha
Helix 31
AD4
A
539 550Right-handed alpha
Helix 32
AD5
A
603 614Right-handed alpha
Helix 33
AD6
A
636 650Right-handed alpha
Helix 34
AD7
A
651 656Right-handed 310
Helix 35
AD8
A
678 692Right-handed alpha
Helix 36
AD9
A
736 739Right-handed 310
Helix 37
AE1
A
748 764Right-handed alpha
Helix 38
AE2
A
775 798Right-handed alpha
Helix 39
AE3
A
804 824Right-handed alpha
Helix 40
AE4
A
826 830Right-handed 310
Helix 41
AE5
A
832 852Right-handed alpha
Helix 42
AE6
A
858 884Right-handed alpha
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There are 9 sheets in PDB entry 9SWO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
134 139anti-parallel
Strand 4
A
144 148anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
98 99anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
324 325anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 385first strand
Strand 2
A
392 396anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 418first strand
Strand 2
A
622 626anti-parallel
Strand 3
A
615 619anti-parallel
Strand 4
A
434 442parallel
Strand 5
A
449 455anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
663 667first strand
Strand 2
A
671 676anti-parallel
Strand 3
A
525 532anti-parallel
Strand 4
A
699 700anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 578first strand
Strand 2
A
556 566anti-parallel
Strand 3
A
588 591anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 578first strand
Strand 2
A
556 566anti-parallel
Strand 3
A
596 600anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
718 719first strand
Strand 2
A
723 726anti-parallel
Strand 3
A
731 734anti-parallel
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