Analysis of interatomic Contacts of Structural Units in PDB entry:
9SXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SXB entry

There are 2 chains in PDB entry 9SXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR -1LYS 434
B
 ARG 0GLU 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9SXB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 23Right-handed alpha
Helix 2
AA2
A
39 48Right-handed alpha
Helix 3
AA3
A
56 68Right-handed alpha
Helix 4
AA4
A
83 97Right-handed alpha
Helix 5
AA5
A
131 145Right-handed alpha
Helix 6
AA6
A
168 170Right-handed 310
Helix 7
AA7
A
173 183Right-handed alpha
Helix 8
AA8
A
188 199Right-handed alpha
Helix 9
AA9
A
220 231Right-handed alpha
Helix 10
AB1
A
262 268Right-handed alpha
Helix 11
AB2
A
270 278Right-handed alpha
Helix 12
AB3
A
285 289Right-handed 310
Helix 13
AB4
A
290 305Right-handed alpha
Helix 14
AB5
A
335 351Right-handed alpha
Helix 15
AB6
A
363 374Right-handed alpha
Helix 16
AB7
A
385 391Right-handed alpha
Helix 17
AB8
A
391 399Right-handed alpha
Helix 18
AB9
A
417 430Right-handed alpha
Helix 19
AC1
B
11 23Right-handed alpha
Helix 20
AC2
B
39 48Right-handed alpha
Helix 21
AC3
B
56 68Right-handed alpha
Helix 22
AC4
B
83 97Right-handed alpha
Helix 23
AC5
B
131 145Right-handed alpha
Helix 24
AC6
B
168 170Right-handed 310
Helix 25
AC7
B
173 184Right-handed alpha
Helix 26
AC8
B
188 199Right-handed alpha
Helix 27
AC9
B
220 231Right-handed alpha
Helix 28
AD1
B
263 268Right-handed alpha
Helix 29
AD2
B
270 276Right-handed alpha
Helix 30
AD3
B
285 289Right-handed 310
Helix 31
AD4
B
290 305Right-handed alpha
Helix 32
AD5
B
335 351Right-handed alpha
Helix 33
AD6
B
363 374Right-handed alpha
Helix 34
AD7
B
385 391Right-handed alpha
Helix 35
AD8
B
391 399Right-handed alpha
Helix 36
AD9
B
417 431Right-handed alpha
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There are 5 sheets in PDB entry 9SXB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
25 30parallel
Strand 3
A
1 6parallel
Strand 4
A
70 75parallel
Strand 5
A
100 102parallel
Strand 6
A
106 108anti-parallel
Strand 7
B
106 108anti-parallel
Strand 8
B
100 102anti-parallel
Strand 9
B
70 75parallel
Strand 10
B
1 6parallel
Strand 11
B
25 30parallel
Strand 12
B
50 52parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
201 210anti-parallel
Strand 3
A
216 219anti-parallel
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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
201 210anti-parallel
Strand 3
A
149 155parallel
Strand 4
A
235 240parallel
Strand 5
A
120 125parallel
Strand 6
A
252 258parallel
Strand 7
A
280 284parallel
Strand 8
A
309 319parallel
Strand 9
A
402 412anti-parallel
Strand 10
A
379 383parallel
Strand 11
A
327 331parallel
Strand 12
A
353 358parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 166first strand
Strand 2
B
201 210anti-parallel
Strand 3
B
216 219anti-parallel
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There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 166first strand
Strand 2
B
201 210anti-parallel
Strand 3
B
149 155parallel
Strand 4
B
235 239parallel
Strand 5
B
120 125parallel
Strand 6
B
252 258parallel
Strand 7
B
280 284parallel
Strand 8
B
309 319parallel
Strand 9
B
402 412anti-parallel
Strand 10
B
379 383parallel
Strand 11
B
327 331parallel
Strand 12
B
353 358parallel
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