Analysis of interatomic Contacts of Structural Units in PDB entry:
9SXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9SXC entry

There are 2 chains in PDB entry 9SXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 76LYS 629
B
SER 7THR 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9SXC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
76 91Right-handed alpha
Helix 2
AA2
A
93 95Right-handed 310
Helix 3
AA3
A
96 111Right-handed alpha
Helix 4
AA4
A
112 123Right-handed alpha
Helix 5
AA5
A
128 135Right-handed alpha
Helix 6
AA6
A
147 160Right-handed alpha
Helix 7
AA7
A
162 176Right-handed alpha
Helix 8
AA8
A
190 202Right-handed alpha
Helix 9
AA9
A
206 217Right-handed alpha
Helix 10
AB1
A
230 234Right-handed 310
Helix 11
AB2
A
244 253Right-handed alpha
Helix 12
AB3
A
257 272Right-handed alpha
Helix 13
AB4
A
276 289Right-handed alpha
Helix 14
AB5
A
291 304Right-handed alpha
Helix 15
AB6
A
315 324Right-handed alpha
Helix 16
AB7
A
335 351Right-handed alpha
Helix 17
AB8
A
352 354Right-handed 310
Helix 18
AB9
A
372 392Right-handed alpha
Helix 19
AC1
A
393 396Right-handed 310
Helix 20
AC2
A
399 411Right-handed alpha
Helix 21
AC3
A
526 544Right-handed alpha
Helix 22
AC4
A
549 569Right-handed alpha
Helix 23
AC5
A
571 581Right-handed alpha
Helix 24
AC6
A
582 591Right-handed alpha
Helix 25
AC7
A
597 605Right-handed alpha
Helix 26
AC8
A
608 628Right-handed alpha
Helix 27
AC9
B
13 25Right-handed alpha
Helix 28
AD1
B
27 38Right-handed alpha
Helix 29
AD2
B
39 42Right-handed 310
Helix 30
AD3
B
52 59Right-handed alpha
Helix 31
AD4
B
64 74Right-handed alpha
Helix 32
AD5
B
88 96Right-handed alpha
Helix 33
AD6
B
98 108Right-handed alpha
Helix 34
AD7
B
115 122Right-handed 310
Helix 35
AD8
B
126 130Right-handed 310
Helix 36
AD9
B
131 145Right-handed alpha
Helix 37
AE1
B
147 153Right-handed alpha
Helix 38
AE2
B
161 168Right-handed alpha
Helix 39
AE3
B
182 189Right-handed alpha
Helix 40
AE4
B
206 232Right-handed alpha
Helix 41
AE5
B
236 241Right-handed alpha
Helix 42
AE6
B
260 264Right-handed 310
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There is 1 sheet (AA1) in PDB entry 9SXC.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
169 172first strand
Strand 2
B
178 181anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il