Analysis of interatomic Contacts of Structural Units in PDB entry:
9T31


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T31 entry

There are 2 chains in PDB entry 9T31 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1VAL 213
B
 SER 1PRO 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 9T31. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
78 84Right-handed alpha
Helix 2
AA2
A
133 140Right-handed alpha
Helix 3
AA3
B
78 84Right-handed alpha
Helix 4
AA4
B
133 140Right-handed alpha
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There are 6 sheets in PDB entry 9T31. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
24 33anti-parallel
Strand 4
A
11 16anti-parallel
Strand 5
A
62 67anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 132first strand
Strand 2
A
119 123anti-parallel
Strand 3
A
103 111anti-parallel
Strand 4
A
89 93anti-parallel
Strand 5
A
143 145anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 175first strand
Strand 2
A
181 189anti-parallel
Strand 3
A
197 201anti-parallel
Strand 4
A
208 210anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
41 45anti-parallel
Strand 3
B
24 33anti-parallel
Strand 4
B
11 16anti-parallel
Strand 5
B
62 67anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
119 123anti-parallel
Strand 3
B
102 111anti-parallel
Strand 4
B
89 94anti-parallel
Strand 5
B
143 145anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
184 189anti-parallel
Strand 3
B
197 201anti-parallel
Strand 4
B
208 210anti-parallel
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