Analysis of interatomic Contacts of Structural Units in PDB entry:
9T33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T33 entry

There are 6 chains in PDB entry 9T33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 15GLU 396
B
 PRO 15GLU 396
C
 PRO 15GLU 396
D
 PRO 15GLU 396
E
 PRO 15GLU 396
F
 PRO 15GLU 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 9T33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed 310
Helix 2
AA2
A
22 49Right-handed alpha
Helix 3
AA3
A
102 117Right-handed alpha
Helix 4
AA4
A
119 141Right-handed alpha
Helix 5
AA5
A
141 146Right-handed alpha
Helix 6
AA6
A
146 165Right-handed alpha
Helix 7
AA7
A
236 255Right-handed alpha
Helix 8
AA8
A
259 286Right-handed alpha
Helix 9
AA9
A
287 289Right-handed 310
Helix 10
AB1
A
299 304Right-handed alpha
Helix 11
AB2
A
314 344Right-handed alpha
Helix 12
AB3
A
370 383Right-handed alpha
Helix 13
AB4
A
383 394Right-handed alpha
Helix 14
AB5
B
16 21Right-handed 310
Helix 15
AB6
B
22 49Right-handed alpha
Helix 16
AB7
B
102 117Right-handed alpha
Helix 17
AB8
B
119 141Right-handed alpha
Helix 18
AB9
B
141 146Right-handed alpha
Helix 19
AC1
B
146 165Right-handed alpha
Helix 20
AC2
B
236 255Right-handed alpha
Helix 21
AC3
B
259 286Right-handed alpha
Helix 22
AC4
B
287 289Right-handed 310
Helix 23
AC5
B
299 304Right-handed alpha
Helix 24
AC6
B
314 344Right-handed alpha
Helix 25
AC7
B
370 383Right-handed alpha
Helix 26
AC8
B
383 394Right-handed alpha
Helix 27
AC9
C
16 21Right-handed 310
Helix 28
AD1
C
22 49Right-handed alpha
Helix 29
AD2
C
102 117Right-handed alpha
Helix 30
AD3
C
119 141Right-handed alpha
Helix 31
AD4
C
141 146Right-handed alpha
Helix 32
AD5
C
146 165Right-handed alpha
Helix 33
AD6
C
236 255Right-handed alpha
Helix 34
AD7
C
259 286Right-handed alpha
Helix 35
AD8
C
287 289Right-handed 310
Helix 36
AD9
C
299 304Right-handed alpha
Helix 37
AE1
C
314 344Right-handed alpha
Helix 38
AE2
C
370 383Right-handed alpha
Helix 39
AE3
C
383 394Right-handed alpha
Helix 40
AE4
D
16 21Right-handed 310
Helix 41
AE5
D
22 49Right-handed alpha
Helix 42
AE6
D
102 117Right-handed alpha
Helix 43
AE7
D
119 141Right-handed alpha
Helix 44
AE8
D
141 146Right-handed alpha
Helix 45
AE9
D
146 165Right-handed alpha
Helix 46
AF1
D
236 255Right-handed alpha
Helix 47
AF2
D
259 286Right-handed alpha
Helix 48
AF3
D
287 289Right-handed 310
Helix 49
AF4
D
299 304Right-handed alpha
Helix 50
AF5
D
314 344Right-handed alpha
Helix 51
AF6
D
370 383Right-handed alpha
Helix 52
AF7
D
383 394Right-handed alpha
Helix 53
AF8
E
16 21Right-handed 310
Helix 54
AF9
E
22 49Right-handed alpha
Helix 55
AG1
E
102 117Right-handed alpha
Helix 56
AG2
E
119 141Right-handed alpha
Helix 57
AG3
E
141 146Right-handed alpha
Helix 58
AG4
E
146 165Right-handed alpha
Helix 59
AG5
E
236 255Right-handed alpha
Helix 60
AG6
E
259 286Right-handed alpha
Helix 61
AG7
E
287 289Right-handed 310
Helix 62
AG8
E
299 304Right-handed alpha
Helix 63
AG9
E
314 344Right-handed alpha
Helix 64
AH1
E
370 383Right-handed alpha
Helix 65
AH2
E
383 394Right-handed alpha
Helix 66
AH3
F
16 21Right-handed 310
Helix 67
AH4
F
22 49Right-handed alpha
Helix 68
AH5
F
102 117Right-handed alpha
Helix 69
AH6
F
119 141Right-handed alpha
Helix 70
AH7
F
141 146Right-handed alpha
Helix 71
AH8
F
146 165Right-handed alpha
Helix 72
AH9
F
236 255Right-handed alpha
Helix 73
AI1
F
259 286Right-handed alpha
Helix 74
AI2
F
287 289Right-handed 310
Helix 75
AI3
F
299 304Right-handed alpha
Helix 76
AI4
F
314 344Right-handed alpha
Helix 77
AI5
F
370 383Right-handed alpha
Helix 78
AI6
F
383 394Right-handed alpha
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There are 6 sheets in PDB entry 9T33. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
307 311anti-parallel
Strand 3
A
292 296anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
307 311anti-parallel
Strand 3
B
292 296anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 56first strand
Strand 2
C
307 311anti-parallel
Strand 3
C
292 296anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 56first strand
Strand 2
D
307 311anti-parallel
Strand 3
D
292 296anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 56first strand
Strand 2
E
307 311anti-parallel
Strand 3
E
292 296anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
53 56first strand
Strand 2
F
307 311anti-parallel
Strand 3
F
292 296anti-parallel
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