Analysis of interatomic Contacts of Structural Units in PDB entry:
9T3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T3F entry

There are 2 chains in PDB entry 9T3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3PRO 180
B
 THR 525GLY 554
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9T3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 29Right-handed alpha
Helix 2
AA2
A
64 69Right-handed 310
Helix 3
AA3
A
70 76Right-handed alpha
Helix 4
AA4
A
89 99Right-handed alpha
Helix 5
AA5
A
99 108Right-handed alpha
Helix 6
AA6
A
119 124Right-handed alpha
Helix 7
AA7
A
125 131Right-handed alpha
Helix 8
AA8
A
139 151Right-handed alpha
Helix 9
AA9
A
165 179Right-handed alpha
Helix 10
AB1
B
526 554Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9T3F.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 49first strand
Strand 2
A
52 61anti-parallel
Strand 3
A
4 12parallel
Strand 4
A
80 86parallel
Strand 5
A
113 118parallel
Strand 6
A
154 157parallel
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