Analysis of interatomic Contacts of Structural Units in PDB entry:
9T3L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T3L entry

There are 2 chains in PDB entry 9T3L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 64VAL 151
B
 ASN 2GLY 127
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 9T3L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 81Right-handed alpha
Helix 2
AA2
A
86 92Right-handed alpha
Helix 3
AA3
A
96 107Right-handed alpha
Helix 4
AA4
A
115 118Right-handed 310
Helix 5
AA5
A
119 125Right-handed alpha
Helix 6
AA6
A
126 131Right-handed alpha
Helix 7
AA7
A
143 151Right-handed alpha
Helix 8
AA8
B
4 11Right-handed alpha
Helix 9
AA9
B
13 24Right-handed alpha
Helix 10
AB1
B
39 48Right-handed alpha
Helix 11
AB2
B
49 60Right-handed alpha
Helix 12
AB3
B
74 78Right-handed 310
Helix 13
AB4
B
80 90Right-handed alpha
Helix 14
AB5
B
104 113Right-handed alpha
Helix 15
AB6
B
115 127Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9T3L.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 85first strand
Strand 2
A
65 68parallel
Strand 3
A
109 113parallel
Strand 4
A
136 138parallel
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