Analysis of interatomic Contacts of Structural Units in PDB entry:
9T47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T47 entry

There is 1 chain in PDB entry 9T47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 139ASN 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 9T47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
182 186Right-handed 310
Helix 2
AA2
A
327 332Right-handed alpha
Helix 3
AA3
A
341 345Right-handed 310
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There are 6 sheets in PDB entry 9T47. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
213 214anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 194first strand
Strand 2
A
209 211anti-parallel
Strand 3
A
237 240anti-parallel
Strand 4
A
243 245anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 220first strand
Strand 2
A
255 257anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 298first strand
Strand 2
A
262 266anti-parallel
Strand 3
A
414 419parallel
Strand 4
A
375 380anti-parallel
Strand 5
A
391 394anti-parallel
Strand 6
A
397 398anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 291first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
317 321anti-parallel
Strand 4
A
347 354anti-parallel
Strand 5
A
302 303parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 291first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
317 321anti-parallel
Strand 4
A
347 354anti-parallel
Strand 5
A
357 364anti-parallel
Strand 6
A
405 411anti-parallel
Strand 7
A
386 388anti-parallel
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