Analysis of interatomic Contacts of Structural Units in PDB entry:
9T4Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T4Q entry

There is 1 chain in PDB entry 9T4Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 188ASN 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 9T4Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
197 203Right-handed alpha
Helix 2
AA2
A
204 207Right-handed 310
Helix 3
AA3
A
383 388Right-handed alpha
Helix 4
AA4
A
397 401Right-handed 310
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There are 6 sheets in PDB entry 9T4Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 236first strand
Strand 2
A
269 270anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 250first strand
Strand 2
A
265 267anti-parallel
Strand 3
A
293 296anti-parallel
Strand 4
A
299 301anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 276first strand
Strand 2
A
311 313anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 354first strand
Strand 2
A
318 322anti-parallel
Strand 3
A
470 475parallel
Strand 4
A
431 436anti-parallel
Strand 5
A
447 450anti-parallel
Strand 6
A
453 454anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 347first strand
Strand 2
A
328 333anti-parallel
Strand 3
A
373 377anti-parallel
Strand 4
A
403 410anti-parallel
Strand 5
A
358 359parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 347first strand
Strand 2
A
328 333anti-parallel
Strand 3
A
373 377anti-parallel
Strand 4
A
403 410anti-parallel
Strand 5
A
413 420anti-parallel
Strand 6
A
461 467anti-parallel
Strand 7
A
442 444anti-parallel
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