Analysis of interatomic Contacts of Structural Units in PDB entry:
9T5H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9T5H entry

There are 14 chains in PDB entry 9T5H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 361	TYR 1482
B	GLU 16	SER 1061
C	PRO 2	ASP 270
D	GLU 14	GLN 141
E	ASP 2	GLN 210
F	GLN 46	ASP 127
G	MET 1	VAL 171
H	ALA 2	ALA 149
I	PRO 9	GLU 125
J	MET 1	LYS 67
K	ASN 2	GLY 115
L	PRO 14	ARG 58
M	ASP 15	LEU 336
N	LYS 41	GLU 172

There are141 helices in PDB entry 9T5H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	382	386	Right-handed alpha
Helix 2	AA2	A	398	409	Right-handed alpha
Helix 3	AA3	A	434	439	Right-handed 310
Helix 4	AA4	A	465	467	Right-handed 310
Helix 5	AA5	A	488	493	Right-handed alpha
Helix 6	AA6	A	508	519	Right-handed alpha
Helix 7	AA7	A	520	524	Right-handed 310
Helix 8	AA8	A	538	550	Right-handed alpha
Helix 9	AA9	A	556	565	Right-handed alpha
Helix 10	AB1	A	588	596	Right-handed alpha
Helix 11	AB2	A	610	616	Right-handed 310
Helix 12	AB3	A	641	646	Right-handed alpha
Helix 13	AB4	A	651	684	Right-handed alpha
Helix 14	AB5	A	688	693	Right-handed alpha
Helix 15	AB6	A	695	722	Right-handed alpha
Helix 16	AB7	A	732	760	Right-handed alpha
Helix 17	AB8	A	764	772	Right-handed alpha
Helix 18	AB9	A	777	786	Right-handed alpha
Helix 19	AC1	A	832	869	Right-handed alpha
Helix 20	AC2	A	890	894	Right-handed 310
Helix 21	AC3	A	897	901	Right-handed 310
Helix 22	AC4	A	912	921	Right-handed alpha
Helix 23	AC5	A	926	934	Right-handed alpha
Helix 24	AC6	A	935	945	Right-handed alpha
Helix 25	AC7	A	945	970	Right-handed alpha
Helix 26	AC8	A	982	994	Right-handed alpha
Helix 27	AC9	A	1005	1020	Right-handed alpha
Helix 28	AD1	A	1027	1038	Right-handed alpha
Helix 29	AD2	A	1038	1049	Right-handed alpha
Helix 30	AD3	A	1050	1057	Right-handed alpha
Helix 31	AD4	A	1061	1080	Right-handed alpha
Helix 32	AD5	A	1086	1100	Right-handed alpha
Helix 33	AD6	A	1120	1130	Right-handed alpha
Helix 34	AD7	A	1145	1149	Right-handed 310
Helix 35	AD8	A	1150	1162	Right-handed alpha
Helix 36	AD9	A	1166	1169	Right-handed alpha
Helix 37	AE1	A	1180	1184	Right-handed 310
Helix 38	AE2	A	1189	1199	Right-handed alpha
Helix 39	AE3	A	1203	1205	Right-handed 310
Helix 40	AE4	A	1217	1223	Right-handed alpha
Helix 41	AE5	A	1227	1240	Right-handed alpha
Helix 42	AE6	A	1280	1296	Right-handed alpha
Helix 43	AE7	A	1342	1347	Right-handed alpha
Helix 44	AE8	A	1361	1369	Right-handed alpha
Helix 45	AE9	A	1370	1389	Right-handed alpha
Helix 46	AF1	A	1394	1405	Right-handed alpha
Helix 47	AF2	A	1478	1482	Right-handed 310
Helix 48	AF3	B	21	38	Right-handed alpha
Helix 49	AF4	B	40	53	Right-handed alpha
Helix 50	AF5	B	53	61	Right-handed alpha
Helix 51	AF6	B	109	116	Right-handed alpha
Helix 52	AF7	B	167	174	Right-handed alpha
Helix 53	AF8	B	246	253	Right-handed alpha
Helix 54	AF9	B	268	276	Right-handed alpha
Helix 55	AG1	B	280	286	Right-handed alpha
Helix 56	AG2	B	294	308	Right-handed alpha
Helix 57	AG3	B	313	323	Right-handed alpha
Helix 58	AG4	B	331	346	Right-handed alpha
Helix 59	AG5	B	348	352	Right-handed 310
Helix 60	AG6	B	354	356	Right-handed 310
Helix 61	AG7	B	357	377	Right-handed alpha
Helix 62	AG8	B	387	389	Right-handed 310
Helix 63	AG9	B	395	424	Right-handed alpha
Helix 64	AH1	B	430	435	Right-handed alpha
Helix 65	AH2	B	437	451	Right-handed alpha
Helix 66	AH3	B	474	482	Right-handed alpha
Helix 67	AH4	B	502	506	Right-handed 310
Helix 68	AH5	B	516	520	Right-handed 310
Helix 69	AH6	B	538	548	Right-handed alpha
Helix 70	AH7	B	579	594	Right-handed alpha
Helix 71	AH8	B	636	645	Right-handed alpha
Helix 72	AH9	B	646	648	Right-handed 310
Helix 73	AI1	B	652	659	Right-handed alpha
Helix 74	AI2	B	668	672	Right-handed 310
Helix 75	AI3	B	699	704	Right-handed 310
Helix 76	AI4	B	706	710	Right-handed 310
Helix 77	AI5	B	713	717	Right-handed 310
Helix 78	AI6	B	718	729	Right-handed alpha
Helix 79	AI7	B	761	766	Right-handed 310
Helix 80	AI8	B	798	803	Right-handed alpha
Helix 81	AI9	B	969	972	Right-handed 310
Helix 82	AJ1	B	977	994	Right-handed alpha
Helix 83	AJ2	B	1007	1017	Right-handed alpha
Helix 84	AJ3	B	1054	1059	Right-handed alpha
Helix 85	AJ4	C	27	41	Right-handed alpha
Helix 86	AJ5	C	60	71	Right-handed alpha
Helix 87	AJ6	C	77	82	Right-handed alpha
Helix 88	AJ7	C	118	120	Right-handed 310
Helix 89	AJ8	C	129	133	Right-handed 310
Helix 90	AJ9	C	173	177	Right-handed 310
Helix 91	AK1	C	199	203	Right-handed 310
Helix 92	AK2	C	240	269	Right-handed alpha
Helix 93	AK3	D	23	28	Right-handed alpha
Helix 94	AK4	D	33	50	Right-handed alpha
Helix 95	AK5	D	58	72	Right-handed alpha
Helix 96	AK6	D	76	89	Right-handed alpha
Helix 97	AK7	D	93	104	Right-handed alpha
Helix 98	AK8	D	107	115	Right-handed alpha
Helix 99	AK9	D	116	119	Right-handed 310
Helix 100	AL1	D	123	136	Right-handed alpha
Helix 101	AL2	E	3	24	Right-handed alpha
Helix 102	AL3	E	29	34	Right-handed alpha
Helix 103	AL4	E	36	45	Right-handed alpha
Helix 104	AL5	E	54	59	Right-handed 310
Helix 105	AL6	E	83	97	Right-handed alpha
Helix 106	AL7	E	111	120	Right-handed alpha
Helix 107	AL8	E	132	137	Right-handed alpha
Helix 108	AL9	E	138	142	Right-handed 310
Helix 109	AM1	E	152	164	Right-handed alpha
Helix 110	AM2	E	166	170	Right-handed 310
Helix 111	AM3	E	177	184	Right-handed alpha
Helix 112	AM4	F	58	75	Right-handed alpha
Helix 113	AM5	F	88	99	Right-handed alpha
Helix 114	AM6	G	14	18	Right-handed 310
Helix 115	AM7	G	21	35	Right-handed alpha
Helix 116	AM8	H	83	88	Right-handed 310
Helix 117	AM9	H	129	133	Right-handed alpha
Helix 118	AN1	I	63	67	Right-handed 310
Helix 119	AN2	I	69	75	Right-handed 310
Helix 120	AN3	J	17	27	Right-handed alpha
Helix 121	AN4	J	30	38	Right-handed alpha
Helix 122	AN5	J	42	51	Right-handed alpha
Helix 123	AN6	J	55	60	Right-handed alpha
Helix 124	AN7	K	5	10	Right-handed 310
Helix 125	AN8	K	39	51	Right-handed alpha
Helix 126	AN9	K	82	115	Right-handed alpha
Helix 127	AO1	M	15	19	Right-handed 310
Helix 128	AO2	M	20	36	Right-handed alpha
Helix 129	AO3	M	37	42	Right-handed alpha
Helix 130	AO4	M	48	66	Right-handed alpha
Helix 131	AO5	M	229	240	Right-handed alpha
Helix 132	AO6	M	305	332	Right-handed alpha
Helix 133	AO7	M	333	335	Right-handed 310
Helix 134	AO8	N	42	47	Right-handed alpha
Helix 135	AO9	N	47	65	Right-handed alpha
Helix 136	AP1	N	71	79	Right-handed alpha
Helix 137	AP2	N	80	82	Right-handed 310
Helix 138	AP3	N	83	97	Right-handed alpha
Helix 139	AP4	N	131	135	Right-handed 310
Helix 140	AP5	N	137	151	Right-handed alpha
Helix 141	AP6	N	155	162	Right-handed 310

There are 44 sheets in PDB entry 9T5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	364	369	first strand
Strand 2	A	482	484	parallel
Strand 3	A	377	381	anti-parallel
Strand 4	A	469	477	parallel
Strand 5	A	455	459	anti-parallel
Strand 6	A	500	504	anti-parallel
Strand 7	A	364	369	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	389	393	first strand
Strand 2	A	445	449	anti-parallel
Strand 3	A	416	420	anti-parallel
Strand 4	A	426	428	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	526	527	first strand
Strand 2	A	532	533	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	554	555	first strand
Strand 2	A	586	587	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	579	581	first strand
Strand 2	H	90	101	anti-parallel
Strand 3	H	140	147	anti-parallel
Strand 4	H	55	61	anti-parallel
Strand 5	H	4	14	anti-parallel
Strand 6	H	25	32	anti-parallel
Strand 7	H	38	44	anti-parallel
Strand 8	H	121	128	anti-parallel
Strand 9	H	111	118	anti-parallel
Strand 10	H	90	101	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	602	605	first strand
Strand 2	A	627	631	anti-parallel
Strand 3	A	634	637	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	789	790	first strand
Strand 2	A	822	823	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	792	793	first strand
Strand 2	A	796	797	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	872	873	first strand
Strand 2	A	879	880	anti-parallel
Strand 3	A	886	888	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	902	905	first strand
Strand 2	A	976	979	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1306	1310	first strand
Strand 2	A	1335	1339	anti-parallel
Strand 3	A	1139	1141	anti-parallel
Strand 4	A	1358	1359	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1164	1165	first strand
Strand 2	A	1297	1299	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1243	1247	first strand
Strand 2	A	1255	1262	anti-parallel
Strand 3	A	1207	1216	anti-parallel
Strand 4	A	1170	1177	anti-parallel
Strand 5	I	52	56	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1319	1322	first strand
Strand 2	A	1328	1331	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1471	1475	first strand
Strand 2	F	104	109	anti-parallel
Strand 3	F	115	119	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	83	93	anti-parallel
Strand 3	B	121	133	anti-parallel
Strand 4	B	140	153	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	83	93	anti-parallel
Strand 3	M	302	303	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	B	106	107	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	187	first strand
Strand 2	B	190	193	anti-parallel
Strand 3	B	468	469	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	394	first strand
Strand 2	B	196	200	anti-parallel
Strand 3	B	484	486	parallel
Strand 4	B	523	525	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	209	first strand
Strand 2	B	215	223	anti-parallel
Strand 3	B	233	240	anti-parallel
Strand 4	B	256	259	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	531	532	first strand
Strand 2	B	621	629	anti-parallel
Strand 3	B	662	666	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	632	633	first strand
Strand 2	B	621	629	anti-parallel
Strand 3	B	695	696	anti-parallel
Strand 4	B	675	676	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	551	552	first strand
Strand 2	B	572	577	anti-parallel
Strand 3	B	565	569	anti-parallel
Strand 4	B	611	615	parallel
Strand 5	B	602	606	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	747	751	first strand
Strand 2	B	808	817	anti-parallel
Strand 3	B	917	927	anti-parallel
Strand 4	B	902	911	anti-parallel
Strand 5	B	859	860	anti-parallel

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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	747	751	first strand
Strand 2	B	808	817	anti-parallel
Strand 3	B	917	927	anti-parallel
Strand 4	B	902	911	anti-parallel
Strand 5	L	43	46	anti-parallel
Strand 6	L	15	19	anti-parallel
Strand 7	L	25	28	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	759	760	first strand
Strand 2	B	997	998	parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1025	1026	first strand
Strand 2	B	1041	1050	anti-parallel
Strand 3	B	934	936	anti-parallel
Strand 4	B	942	949	anti-parallel
Strand 5	B	794	797	parallel
Strand 6	B	965	967	anti-parallel
Strand 7	B	776	782	parallel
Strand 8	B	1041	1050	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	819	820	first strand
Strand 2	B	826	829	anti-parallel
Strand 3	B	869	872	anti-parallel
Strand 4	B	889	891	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	865	867	first strand
Strand 2	B	894	895	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	14	first strand
Strand 2	C	18	24	anti-parallel
Strand 3	C	228	235	anti-parallel
Strand 4	C	179	186	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	C	99	106	anti-parallel
Strand 3	C	158	168	anti-parallel
Strand 4	C	44	55	anti-parallel
Strand 5	L	54	55	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	116	first strand
Strand 2	C	149	153	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	31	first strand
Strand 2	G	2	13	anti-parallel
Strand 3	G	66	77	anti-parallel
Strand 4	G	43	54	anti-parallel
Strand 5	G	38	39	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	31	first strand
Strand 2	G	2	13	anti-parallel
Strand 3	G	66	77	anti-parallel
Strand 4	G	58	59	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	63	first strand
Strand 2	E	71	75	anti-parallel
Strand 3	E	101	106	parallel
Strand 4	E	126	131	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	81	82	first strand
Strand 2	E	109	110	parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	147	150	first strand
Strand 2	E	190	197	anti-parallel
Strand 3	E	201	210	anti-parallel
Strand 4	E	172	174	parallel

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There are 7 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	170	first strand
Strand 2	G	142	153	anti-parallel
Strand 3	G	156	162	anti-parallel
Strand 4	G	104	109	parallel
Strand 5	G	96	101	anti-parallel
Strand 6	G	84	93	anti-parallel
Strand 7	G	142	153	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	117	120	first strand
Strand 2	G	127	130	anti-parallel
Strand 3	G	136	137	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	25	29	first strand
Strand 2	I	34	38	anti-parallel
Strand 3	I	45	47	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	80	81	first strand
Strand 2	I	94	97	anti-parallel
Strand 3	I	111	114	anti-parallel
Strand 4	I	122	124	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	23	first strand
Strand 2	K	30	36	anti-parallel
Strand 3	K	70	77	anti-parallel
Strand 4	K	56	62	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	117	119	first strand
Strand 2	N	126	128	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 9T5H

Analysis of interatomic Contacts of Structural Units in PDB entry:
9T5H