Analysis of interatomic Contacts of Structural Units in PDB entry:
9T5O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9T5O entry

There are 10 chains in PDB entry 9T5O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 15	GLU 808
B	PRO 15	GLN 711
C	PRO 15	GLU 808
D	PRO 15	GLU 808
G	GLN 1	SER 114
H	GLN 1	SER 114
I	GLN 1	SER 114
J	GLN 1	SER 114
E	PRO 15	TRP 455
F	PRO 15	TRP 455

There are158 helices in PDB entry 9T5O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	21	Right-handed 310
Helix 2	AA2	A	22	49	Right-handed alpha
Helix 3	AA3	A	102	117	Right-handed alpha
Helix 4	AA4	A	119	141	Right-handed alpha
Helix 5	AA5	A	141	146	Right-handed alpha
Helix 6	AA6	A	146	165	Right-handed alpha
Helix 7	AA7	A	166	176	Right-handed alpha
Helix 8	AA8	A	233	255	Right-handed alpha
Helix 9	AA9	A	259	286	Right-handed alpha
Helix 10	AB1	A	287	289	Right-handed 310
Helix 11	AB2	A	314	347	Right-handed alpha
Helix 12	AB3	A	353	361	Right-handed alpha
Helix 13	AB4	A	372	383	Right-handed alpha
Helix 14	AB5	A	383	394	Right-handed alpha
Helix 15	AB6	A	395	411	Right-handed alpha
Helix 16	AB7	A	413	419	Right-handed alpha
Helix 17	AB8	A	462	468	Right-handed 310
Helix 18	AB9	A	484	495	Right-handed alpha
Helix 19	AC1	A	511	515	Right-handed 310
Helix 20	AC2	A	535	543	Right-handed 310
Helix 21	AC3	A	559	566	Right-handed alpha
Helix 22	AC4	A	629	638	Right-handed 310
Helix 23	AC5	A	655	661	Right-handed 310
Helix 24	AC6	A	678	684	Right-handed 310
Helix 25	AC7	A	701	707	Right-handed 310
Helix 26	AC8	A	724	730	Right-handed 310
Helix 27	AC9	A	747	753	Right-handed 310
Helix 28	AD1	A	789	793	Right-handed 310
Helix 29	AD2	A	795	807	Right-handed alpha
Helix 30	AD3	B	15	20	Right-handed 310
Helix 31	AD4	B	22	50	Right-handed alpha
Helix 32	AD5	B	102	117	Right-handed alpha
Helix 33	AD6	B	119	146	Right-handed alpha
Helix 34	AD7	B	146	165	Right-handed alpha
Helix 35	AD8	B	166	176	Right-handed alpha
Helix 36	AD9	B	233	255	Right-handed alpha
Helix 37	AE1	B	259	286	Right-handed alpha
Helix 38	AE2	B	287	289	Right-handed 310
Helix 39	AE3	B	314	346	Right-handed alpha
Helix 40	AE4	B	353	360	Right-handed alpha
Helix 41	AE5	B	372	383	Right-handed alpha
Helix 42	AE6	B	383	392	Right-handed alpha
Helix 43	AE7	B	396	411	Right-handed alpha
Helix 44	AE8	B	412	419	Right-handed alpha
Helix 45	AE9	B	441	445	Right-handed 310
Helix 46	AF1	B	462	468	Right-handed 310
Helix 47	AF2	B	484	495	Right-handed alpha
Helix 48	AF3	B	504	508	Right-handed 310
Helix 49	AF4	B	510	515	Right-handed 310
Helix 50	AF5	B	535	543	Right-handed 310
Helix 51	AF6	B	559	566	Right-handed alpha
Helix 52	AF7	B	629	637	Right-handed 310
Helix 53	AF8	B	655	661	Right-handed 310
Helix 54	AF9	B	678	684	Right-handed 310
Helix 55	AG1	B	701	707	Right-handed 310
Helix 56	AG2	C	15	20	Right-handed 310
Helix 57	AG3	C	22	49	Right-handed alpha
Helix 58	AG4	C	102	117	Right-handed alpha
Helix 59	AG5	C	119	146	Right-handed alpha
Helix 60	AG6	C	146	165	Right-handed alpha
Helix 61	AG7	C	166	176	Right-handed alpha
Helix 62	AG8	C	233	255	Right-handed alpha
Helix 63	AG9	C	259	286	Right-handed alpha
Helix 64	AH1	C	287	289	Right-handed 310
Helix 65	AH2	C	314	347	Right-handed alpha
Helix 66	AH3	C	353	360	Right-handed alpha
Helix 67	AH4	C	372	383	Right-handed alpha
Helix 68	AH5	C	383	395	Right-handed alpha
Helix 69	AH6	C	396	411	Right-handed alpha
Helix 70	AH7	C	412	419	Right-handed alpha
Helix 71	AH8	C	439	445	Right-handed 310
Helix 72	AH9	C	462	468	Right-handed 310
Helix 73	AI1	C	484	495	Right-handed alpha
Helix 74	AI2	C	504	508	Right-handed 310
Helix 75	AI3	C	510	515	Right-handed 310
Helix 76	AI4	C	535	543	Right-handed 310
Helix 77	AI5	C	559	566	Right-handed alpha
Helix 78	AI6	C	629	638	Right-handed 310
Helix 79	AI7	C	655	661	Right-handed 310
Helix 80	AI8	C	678	684	Right-handed 310
Helix 81	AI9	C	701	706	Right-handed 310
Helix 82	AJ1	C	724	730	Right-handed 310
Helix 83	AJ2	C	747	753	Right-handed 310
Helix 84	AJ3	C	770	775	Right-handed 310
Helix 85	AJ4	C	787	792	Right-handed alpha
Helix 86	AJ5	C	795	808	Right-handed alpha
Helix 87	AJ6	D	15	20	Right-handed 310
Helix 88	AJ7	D	22	50	Right-handed alpha
Helix 89	AJ8	D	102	117	Right-handed alpha
Helix 90	AJ9	D	119	146	Right-handed alpha
Helix 91	AK1	D	146	166	Right-handed alpha
Helix 92	AK2	D	166	176	Right-handed alpha
Helix 93	AK3	D	218	222	Right-handed 310
Helix 94	AK4	D	233	258	Right-handed alpha
Helix 95	AK5	D	259	286	Right-handed alpha
Helix 96	AK6	D	287	289	Right-handed 310
Helix 97	AK7	D	314	347	Right-handed alpha
Helix 98	AK8	D	353	360	Right-handed alpha
Helix 99	AK9	D	372	383	Right-handed alpha
Helix 100	AL1	D	383	392	Right-handed alpha
Helix 101	AL2	D	396	411	Right-handed alpha
Helix 102	AL3	D	412	420	Right-handed alpha
Helix 103	AL4	D	462	468	Right-handed 310
Helix 104	AL5	D	484	495	Right-handed alpha
Helix 105	AL6	D	504	508	Right-handed 310
Helix 106	AL7	D	535	543	Right-handed 310
Helix 107	AL8	D	559	566	Right-handed alpha
Helix 108	AL9	D	629	638	Right-handed 310
Helix 109	AM1	D	655	661	Right-handed 310
Helix 110	AM2	D	678	684	Right-handed 310
Helix 111	AM3	D	701	707	Right-handed 310
Helix 112	AM4	D	724	730	Right-handed 310
Helix 113	AM5	D	747	753	Right-handed 310
Helix 114	AM6	D	770	775	Right-handed 310
Helix 115	AM7	D	787	792	Right-handed alpha
Helix 116	AM8	D	795	808	Right-handed alpha
Helix 117	AM9	G	28	32	Right-handed 310
Helix 118	AN1	G	87	91	Right-handed 310
Helix 119	AN2	H	28	32	Right-handed 310
Helix 120	AN3	H	87	91	Right-handed 310
Helix 121	AN4	I	28	32	Right-handed 310
Helix 122	AN5	I	87	91	Right-handed 310
Helix 123	AN6	J	28	32	Right-handed 310
Helix 124	AN7	J	87	91	Right-handed 310
Helix 125	AN8	E	16	21	Right-handed alpha
Helix 126	AN9	E	22	50	Right-handed alpha
Helix 127	AO1	E	142	157	Right-handed alpha
Helix 128	AO2	E	159	164	Right-handed alpha
Helix 129	AO3	E	164	182	Right-handed alpha
Helix 130	AO4	E	183	185	Right-handed 310
Helix 131	AO5	E	186	205	Right-handed alpha
Helix 132	AO6	E	210	216	Right-handed alpha
Helix 133	AO7	E	278	283	Right-handed alpha
Helix 134	AO8	E	283	299	Right-handed alpha
Helix 135	AO9	E	302	327	Right-handed alpha
Helix 136	AP1	E	343	348	Right-handed alpha
Helix 137	AP2	E	358	390	Right-handed alpha
Helix 138	AP3	E	413	427	Right-handed alpha
Helix 139	AP4	E	427	433	Right-handed alpha
Helix 140	AP5	E	441	446	Right-handed alpha
Helix 141	AP6	E	446	451	Right-handed alpha
Helix 142	AP7	E	452	455	Right-handed 310
Helix 143	AP8	F	22	49	Right-handed alpha
Helix 144	AP9	F	142	157	Right-handed alpha
Helix 145	AQ1	F	160	181	Right-handed alpha
Helix 146	AQ2	F	181	186	Right-handed alpha
Helix 147	AQ3	F	186	201	Right-handed alpha
Helix 148	AQ4	F	201	206	Right-handed alpha
Helix 149	AQ5	F	207	212	Right-handed alpha
Helix 150	AQ6	F	278	287	Right-handed alpha
Helix 151	AQ7	F	288	296	Right-handed alpha
Helix 152	AQ8	F	302	331	Right-handed alpha
Helix 153	AQ9	F	358	390	Right-handed alpha
Helix 154	AR1	F	397	402	Right-handed alpha
Helix 155	AR2	F	413	425	Right-handed alpha
Helix 156	AR3	F	428	434	Right-handed alpha
Helix 157	AR4	F	440	445	Right-handed alpha
Helix 158	AR5	F	445	452	Right-handed alpha

There are 31 sheets in PDB entry 9T5O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	308	311	anti-parallel
Strand 3	A	292	295	anti-parallel

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There are 16 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	432	first strand
Strand 2	A	450	454	parallel
Strand 3	A	473	477	parallel
Strand 4	A	497	501	parallel
Strand 5	A	520	524	parallel
Strand 6	A	548	552	parallel
Strand 7	A	571	575	parallel
Strand 8	A	595	599	parallel
Strand 9	A	618	620	parallel
Strand 10	A	643	645	parallel
Strand 11	A	666	668	parallel
Strand 12	A	689	691	parallel
Strand 13	A	712	714	parallel
Strand 14	A	735	737	parallel
Strand 15	A	758	760	parallel
Strand 16	A	784	785	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	459	460	first strand
Strand 2	A	481	482	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	308	311	anti-parallel
Strand 3	B	292	295	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	61	first strand
Strand 2	B	64	65	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	421	422	first strand
Strand 2	B	428	431	anti-parallel
Strand 3	B	450	454	parallel
Strand 4	B	473	477	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	459	461	first strand
Strand 2	B	481	483	parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	501	first strand
Strand 2	B	523	524	parallel
Strand 3	B	548	552	parallel
Strand 4	B	571	575	parallel
Strand 5	B	595	599	parallel
Strand 6	B	618	620	parallel
Strand 7	B	643	645	parallel
Strand 8	B	666	668	parallel
Strand 9	B	689	691	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	56	first strand
Strand 2	C	308	311	anti-parallel
Strand 3	C	292	295	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	61	first strand
Strand 2	C	64	65	anti-parallel

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There are 11 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	421	422	first strand
Strand 2	C	428	433	anti-parallel
Strand 3	C	450	454	parallel
Strand 4	C	473	477	parallel
Strand 5	C	497	501	parallel
Strand 6	C	520	524	parallel
Strand 7	C	548	552	parallel
Strand 8	C	571	575	parallel
Strand 9	C	595	599	parallel
Strand 10	C	618	620	parallel
Strand 11	C	643	645	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	460	461	first strand
Strand 2	C	482	483	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	689	691	first strand
Strand 2	C	712	714	parallel
Strand 3	C	735	737	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	308	311	anti-parallel
Strand 3	D	292	295	anti-parallel

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There are 14 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	430	433	first strand
Strand 2	D	451	454	parallel
Strand 3	D	475	477	parallel
Strand 4	D	497	501	parallel
Strand 5	D	520	524	parallel
Strand 6	D	548	551	parallel
Strand 7	D	571	575	parallel
Strand 8	D	595	599	parallel
Strand 9	D	618	620	parallel
Strand 10	D	643	645	parallel
Strand 11	D	666	668	parallel
Strand 12	D	689	691	parallel
Strand 13	D	712	714	parallel
Strand 14	D	735	737	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	459	461	first strand
Strand 2	D	481	483	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	759	760	first strand
Strand 2	D	784	785	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	18	24	anti-parallel
Strand 3	G	78	83	anti-parallel
Strand 4	G	68	73	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	13	first strand
Strand 2	G	109	114	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	46	51	anti-parallel
Strand 6	G	58	60	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	13	first strand
Strand 2	G	109	114	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	103	104	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	7	first strand
Strand 2	H	17	24	anti-parallel
Strand 3	H	78	84	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	109	113	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	109	113	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	103	105	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	7	first strand
Strand 2	I	18	24	anti-parallel
Strand 3	I	78	83	anti-parallel
Strand 4	I	68	73	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	13	first strand
Strand 2	I	109	114	parallel
Strand 3	I	92	99	anti-parallel
Strand 4	I	34	39	anti-parallel
Strand 5	I	46	51	anti-parallel
Strand 6	I	58	60	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	13	first strand
Strand 2	I	109	114	parallel
Strand 3	I	92	99	anti-parallel
Strand 4	I	103	105	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	4	7	first strand
Strand 2	J	17	24	anti-parallel
Strand 3	J	78	84	anti-parallel
Strand 4	J	68	73	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	13	first strand
Strand 2	J	109	114	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	46	51	anti-parallel
Strand 6	J	58	60	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	11	13	first strand
Strand 2	J	109	114	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	103	105	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	55	56	first strand
Strand 2	E	352	355	anti-parallel
Strand 3	E	336	339	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	56	first strand
Strand 2	F	352	356	anti-parallel
Strand 3	F	336	339	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9T5O

Analysis of interatomic Contacts of Structural Units in PDB entry:
9T5O