Analysis of interatomic Contacts of Structural Units in PDB entry:
9T5R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T5R entry

There is 1 chain in PDB entry 9T5R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ASP 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9T5R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 14Right-handed alpha
Helix 2
AA2
A
15 23Right-handed alpha
Helix 3
AA3
A
42 48Right-handed 310
Helix 4
AA4
A
65 71Right-handed 310
Helix 5
AA5
A
87 98Right-handed alpha
Helix 6
AA6
A
107 111Right-handed 310
Helix 7
AA7
A
112 118Right-handed 310
Helix 8
AA8
A
162 169Right-handed 310
Helix 9
AA9
A
187 193Right-handed 310
Helix 10
AB1
A
210 216Right-handed 310
Helix 11
AB2
A
232 241Right-handed 310
Helix 12
AB3
A
258 264Right-handed 310
Helix 13
AB4
A
281 287Right-handed 310
Helix 14
AB5
A
304 310Right-handed 310
Helix 15
AB6
A
327 333Right-handed 310
Helix 16
AB7
A
350 356Right-handed 310
Helix 17
AB8
A
373 379Right-handed 310
Helix 18
AB9
A
383 385Right-handed 310
Helix 19
AC1
A
390 395Right-handed alpha
Helix 20
AC2
A
398 406Right-handed alpha
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There are 2 sheets in PDB entry 9T5R. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 17 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
31 36anti-parallel
Strand 3
A
53 57parallel
Strand 4
A
76 80parallel
Strand 5
A
100 104parallel
Strand 6
A
123 127parallel
Strand 7
A
151 156parallel
Strand 8
A
174 179parallel
Strand 9
A
198 202parallel
Strand 10
A
221 223parallel
Strand 11
A
246 248parallel
Strand 12
A
269 271parallel
Strand 13
A
292 294parallel
Strand 14
A
315 317parallel
Strand 15
A
338 340parallel
Strand 16
A
361 363parallel
Strand 17
A
387 388parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
85 86parallel
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