Analysis of interatomic Contacts of Structural Units in PDB entry:
9T6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T6A entry

There are 2 chains in PDB entry 9T6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 13HIS 276
A
 TYR 278LYS 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9T6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
37 50Right-handed alpha
Helix 3
AA3
A
54 58Right-handed 310
Helix 4
AA4
A
68 78Right-handed alpha
Helix 5
AA5
A
89 107Right-handed alpha
Helix 6
AA6
A
116 120Right-handed 310
Helix 7
AA7
A
127 148Right-handed alpha
Helix 8
AA8
A
164 174Right-handed alpha
Helix 9
AA9
A
191 199Right-handed alpha
Helix 10
AB1
A
220 234Right-handed alpha
Helix 11
AB2
A
247 250Right-handed 310
Helix 12
AB3
A
251 256Right-handed alpha
Helix 13
AB4
A
292 296Right-handed 310
Helix 14
AB5
A
297 301Right-handed 310
Helix 15
AB6
A
322 361Right-handed alpha
Helix 16
AB7
A
387 396Right-handed alpha
Helix 17
AB8
A
397 399Right-handed 310
Helix 18
AB9
A
426 446Right-handed alpha
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There are 3 sheets in PDB entry 9T6A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 125first strand
Strand 2
A
286 290anti-parallel
Strand 3
A
268 274anti-parallel
Strand 4
A
241 244parallel
Strand 5
A
203 209parallel
Strand 6
A
156 160parallel
Strand 7
A
177 181parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
311 313anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 369first strand
Strand 2
A
375 379anti-parallel
Strand 3
A
415 420anti-parallel
Strand 4
A
404 406anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il