Analysis of interatomic Contacts of Structural Units in PDB entry:
9T6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T6N entry

There are 4 chains in PDB entry 9T6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 10ASP 252
C
 VAL 100GLY 492
D
 ILE 4VAL 398
E
 ASP 17GLU 68
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 9T6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
46 51Right-handed 310
Helix 2
AA2
B
53 63Right-handed alpha
Helix 3
AA3
B
69 82Right-handed alpha
Helix 4
AA4
B
94 107Right-handed alpha
Helix 5
AA5
B
122 137Right-handed alpha
Helix 6
AA6
B
155 164Right-handed alpha
Helix 7
AA7
B
172 182Right-handed alpha
Helix 8
AA8
B
198 203Right-handed alpha
Helix 9
AA9
B
206 217Right-handed alpha
Helix 10
AB1
B
235 240Right-handed alpha
Helix 11
AB2
B
241 243Right-handed 310
Helix 12
AB3
C
103 121Right-handed alpha
Helix 13
AB4
C
127 131Right-handed 310
Helix 14
AB5
C
143 154Right-handed alpha
Helix 15
AB6
C
169 173Right-handed 310
Helix 16
AB7
C
188 192Right-handed 310
Helix 17
AB8
C
194 209Right-handed alpha
Helix 18
AB9
C
216 238Right-handed alpha
Helix 19
AC1
C
244 263Right-handed alpha
Helix 20
AC2
C
272 296Right-handed alpha
Helix 21
AC3
C
304 314Right-handed alpha
Helix 22
AC4
C
320 326Right-handed alpha
Helix 23
AC5
C
329 334Right-handed alpha
Helix 24
AC6
C
335 350Right-handed alpha
Helix 25
AC7
C
352 361Right-handed alpha
Helix 26
AC8
C
364 372Right-handed alpha
Helix 27
AC9
C
374 390Right-handed alpha
Helix 28
AD1
C
402 410Right-handed alpha
Helix 29
AD2
C
413 423Right-handed alpha
Helix 30
AD3
C
452 457Right-handed alpha
Helix 31
AD4
C
462 469Right-handed alpha
Helix 32
AD5
D
5 19Right-handed alpha
Helix 33
AD6
D
21 28Right-handed alpha
Helix 34
AD7
D
48 53Right-handed 310
Helix 35
AD8
D
57 73Right-handed alpha
Helix 36
AD9
D
76 96Right-handed alpha
Helix 37
AE1
D
104 126Right-handed alpha
Helix 38
AE2
D
137 154Right-handed alpha
Helix 39
AE3
D
163 166Right-handed 310
Helix 40
AE4
D
167 183Right-handed alpha
Helix 41
AE5
D
187 198Right-handed alpha
Helix 42
AE6
D
205 223Right-handed alpha
Helix 43
AE7
D
225 239Right-handed alpha
Helix 44
AE8
D
244 261Right-handed alpha
Helix 45
AE9
D
267 274Right-handed alpha
Helix 46
AF1
D
275 278Right-handed 310
Helix 47
AF2
D
279 288Right-handed alpha
Helix 48
AF3
D
290 301Right-handed alpha
Helix 49
AF4
D
301 309Right-handed alpha
Helix 50
AF5
D
313 316Right-handed 310
Helix 51
AF6
D
317 334Right-handed alpha
Helix 52
AF7
D
340 350Right-handed alpha
Helix 53
AF8
D
356 371Right-handed alpha
Helix 54
AF9
D
394 398Right-handed 310
Helix 55
AG1
E
28 32Right-handed 310
Helix 56
AG2
E
50 63Right-handed alpha
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There are 4 sheets in PDB entry 9T6N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 148first strand
Strand 2
B
168 171parallel
Strand 3
B
116 119parallel
Strand 4
B
192 196parallel
Strand 5
B
223 228parallel
Strand 6
B
85 88parallel
Strand 7
B
247 250parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
398 401first strand
Strand 2
C
432 435anti-parallel
Strand 3
C
427 429anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
265 266first strand
Strand 2
E
39 40anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
337 339first strand
Strand 2
D
383 386anti-parallel
Strand 3
D
375 378anti-parallel
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