Analysis of interatomic Contacts of Structural Units in PDB entry:
9T7M

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9T7M entry

There are 3 chains in PDB entry 9T7M (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	LEU 587	ARG 1132
A	LEU 587	ASP 1134
B	LEU 587	TYR 796

There are 81 helices in PDB entry 9T7M. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	598	605	Right-handed alpha
Helix 2	AA2	E	630	636	Right-handed alpha
Helix 3	AA3	E	671	675	Right-handed 310
Helix 4	AA4	E	700	704	Right-handed 310
Helix 5	AA5	E	736	746	Right-handed alpha
Helix 6	AA6	E	756	767	Right-handed alpha
Helix 7	AA7	E	772	776	Right-handed 310
Helix 8	AA8	E	798	816	Right-handed alpha
Helix 9	AA9	E	841	845	Right-handed 310
Helix 10	AB1	E	982	986	Right-handed 310
Helix 11	AB2	E	1062	1082	Right-handed alpha
Helix 12	AB3	E	1087	1091	Right-handed 310
Helix 13	AB4	E	1092	1103	Right-handed alpha
Helix 14	AB5	E	1123	1132	Right-handed alpha
Helix 15	AB6	A	597	605	Right-handed alpha
Helix 16	AB7	A	607	609	Right-handed 310
Helix 17	AB8	A	627	636	Right-handed alpha
Helix 18	AB9	A	672	677	Right-handed alpha
Helix 19	AC1	A	700	704	Right-handed 310
Helix 20	AC2	A	736	746	Right-handed alpha
Helix 21	AC3	A	756	767	Right-handed alpha
Helix 22	AC4	A	772	776	Right-handed 310
Helix 23	AC5	A	798	816	Right-handed alpha
Helix 24	AC6	A	982	986	Right-handed 310
Helix 25	AC7	A	1062	1082	Right-handed alpha
Helix 26	AC8	A	1087	1091	Right-handed 310
Helix 27	AC9	A	1092	1103	Right-handed alpha
Helix 28	AD1	A	1123	1133	Right-handed alpha
Helix 29	AD2	B	597	605	Right-handed alpha
Helix 30	AD3	B	607	609	Right-handed 310
Helix 31	AD4	B	629	636	Right-handed alpha
Helix 32	AD5	B	670	677	Right-handed alpha
Helix 33	AD6	B	700	704	Right-handed 310
Helix 34	AD7	B	736	746	Right-handed alpha
Helix 35	AD8	B	756	767	Right-handed alpha
Helix 36	AD9	B	772	776	Right-handed 310
Helix 37	AE1	B	798	816	Right-handed alpha
Helix 38	AE2	B	841	845	Right-handed 310
Helix 39	AE3	B	1062	1082	Right-handed alpha
Helix 40	AE4	B	1087	1091	Right-handed 310
Helix 41	AE5	B	1092	1103	Right-handed alpha
Helix 42	AE6	B	1123	1132	Right-handed alpha
Helix 43	AE7	C	597	605	Right-handed alpha
Helix 44	AE8	C	607	609	Right-handed 310
Helix 45	AE9	C	627	636	Right-handed alpha
Helix 46	AF1	C	672	677	Right-handed alpha
Helix 47	AF2	C	700	704	Right-handed 310
Helix 48	AF3	C	736	746	Right-handed alpha
Helix 49	AF4	C	756	767	Right-handed alpha
Helix 50	AF5	C	772	776	Right-handed 310
Helix 51	AF6	C	798	816	Right-handed alpha
Helix 52	AF7	C	982	986	Right-handed 310
Helix 53	AF8	C	1062	1082	Right-handed alpha
Helix 54	AF9	C	1087	1091	Right-handed 310
Helix 55	AG1	C	1092	1103	Right-handed alpha
Helix 56	AG2	C	1123	1132	Right-handed alpha
Helix 57	AG3	D	597	605	Right-handed alpha
Helix 58	AG4	D	630	636	Right-handed alpha
Helix 59	AG5	D	672	677	Right-handed alpha
Helix 60	AG6	D	700	704	Right-handed 310
Helix 61	AG7	D	736	746	Right-handed alpha
Helix 62	AG8	D	756	767	Right-handed alpha
Helix 63	AG9	D	772	776	Right-handed 310
Helix 64	AH1	D	798	816	Right-handed alpha
Helix 65	AH2	D	1062	1082	Right-handed alpha
Helix 66	AH3	D	1087	1091	Right-handed 310
Helix 67	AH4	D	1092	1104	Right-handed alpha
Helix 68	AH5	D	1123	1133	Right-handed alpha
Helix 69	AH6	F	597	604	Right-handed alpha
Helix 70	AH7	F	629	636	Right-handed alpha
Helix 71	AH8	F	671	675	Right-handed 310
Helix 72	AH9	F	700	704	Right-handed 310
Helix 73	AI1	F	736	746	Right-handed alpha
Helix 74	AI2	F	756	767	Right-handed alpha
Helix 75	AI3	F	772	776	Right-handed 310
Helix 76	AI4	F	798	816	Right-handed alpha
Helix 77	AI5	F	837	841	Right-handed 310
Helix 78	AI6	F	1062	1082	Right-handed alpha
Helix 79	AI7	F	1087	1091	Right-handed 310
Helix 80	AI8	F	1092	1103	Right-handed alpha
Helix 81	AI9	F	1123	1133	Right-handed alpha

There are 42 sheets in PDB entry 9T7M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	611	613	first strand
Strand 2	E	618	622	anti-parallel
Strand 3	E	589	594	anti-parallel
Strand 4	E	640	645	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	796	797	first strand
Strand 2	E	648	651	anti-parallel
Strand 3	E	825	826	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	654	657	first strand
Strand 2	E	1056	1061	anti-parallel
Strand 3	E	1048	1052	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	732	735	first strand
Strand 2	E	712	717	anti-parallel
Strand 3	E	783	788	parallel
Strand 4	E	688	693	parallel
Strand 5	E	819	823	parallel
Strand 6	E	848	853	parallel
Strand 7	E	1011	1017	parallel
Strand 8	E	1022	1023	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	732	735	first strand
Strand 2	E	712	717	anti-parallel
Strand 3	E	783	788	parallel
Strand 4	E	688	693	parallel
Strand 5	E	819	823	parallel
Strand 6	E	848	853	parallel
Strand 7	E	1011	1017	parallel
Strand 8	E	1041	1044	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	863	867	first strand
Strand 2	E	975	979	anti-parallel
Strand 3	E	885	894	anti-parallel
Strand 4	E	948	957	anti-parallel
Strand 5	E	932	939	anti-parallel
Strand 6	E	922	927	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	899	905	first strand
Strand 2	E	960	970	anti-parallel
Strand 3	E	874	881	anti-parallel
Strand 4	E	991	992	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	611	613	first strand
Strand 2	A	618	622	anti-parallel
Strand 3	A	589	594	anti-parallel
Strand 4	A	640	645	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	791	792	first strand
Strand 2	A	795	797	anti-parallel
Strand 3	A	648	651	anti-parallel
Strand 4	A	825	826	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	657	first strand
Strand 2	A	1056	1061	anti-parallel
Strand 3	A	1048	1052	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	732	735	first strand
Strand 2	A	712	717	anti-parallel
Strand 3	A	783	788	parallel
Strand 4	A	688	693	parallel
Strand 5	A	819	823	parallel
Strand 6	A	848	853	parallel
Strand 7	A	1011	1017	parallel
Strand 8	A	1022	1023	anti-parallel

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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	732	735	first strand
Strand 2	A	712	717	anti-parallel
Strand 3	A	783	788	parallel
Strand 4	A	688	693	parallel
Strand 5	A	819	823	parallel
Strand 6	A	848	853	parallel
Strand 7	A	1011	1017	parallel
Strand 8	A	1041	1044	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	863	867	first strand
Strand 2	A	975	979	anti-parallel
Strand 3	A	885	894	anti-parallel
Strand 4	A	948	957	anti-parallel
Strand 5	A	932	939	anti-parallel
Strand 6	A	920	927	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	899	905	first strand
Strand 2	A	960	970	anti-parallel
Strand 3	A	874	881	anti-parallel
Strand 4	A	991	992	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	611	613	first strand
Strand 2	B	618	622	anti-parallel
Strand 3	B	589	594	anti-parallel
Strand 4	B	640	645	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	796	797	first strand
Strand 2	B	648	651	anti-parallel
Strand 3	B	825	826	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	657	first strand
Strand 2	B	1056	1061	anti-parallel
Strand 3	B	1048	1052	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	732	735	first strand
Strand 2	B	712	717	anti-parallel
Strand 3	B	783	788	parallel
Strand 4	B	688	693	parallel
Strand 5	B	819	823	parallel
Strand 6	B	848	853	parallel
Strand 7	B	1011	1017	parallel
Strand 8	B	1022	1023	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	732	735	first strand
Strand 2	B	712	717	anti-parallel
Strand 3	B	783	788	parallel
Strand 4	B	688	693	parallel
Strand 5	B	819	823	parallel
Strand 6	B	848	853	parallel
Strand 7	B	1011	1017	parallel
Strand 8	B	1041	1044	parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	863	867	first strand
Strand 2	B	975	979	anti-parallel
Strand 3	B	885	894	anti-parallel
Strand 4	B	948	957	anti-parallel
Strand 5	B	933	939	anti-parallel
Strand 6	B	920	926	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	899	905	first strand
Strand 2	B	960	970	anti-parallel
Strand 3	B	874	881	anti-parallel
Strand 4	B	991	992	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	611	613	first strand
Strand 2	C	618	622	anti-parallel
Strand 3	C	589	594	anti-parallel
Strand 4	C	640	645	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	796	797	first strand
Strand 2	C	648	651	anti-parallel
Strand 3	C	825	826	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	657	first strand
Strand 2	C	1056	1061	anti-parallel
Strand 3	C	1048	1052	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	732	735	first strand
Strand 2	C	712	717	anti-parallel
Strand 3	C	783	788	parallel
Strand 4	C	688	693	parallel
Strand 5	C	819	823	parallel
Strand 6	C	848	853	parallel
Strand 7	C	1011	1017	parallel
Strand 8	C	1022	1023	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	732	735	first strand
Strand 2	C	712	717	anti-parallel
Strand 3	C	783	788	parallel
Strand 4	C	688	693	parallel
Strand 5	C	819	823	parallel
Strand 6	C	848	853	parallel
Strand 7	C	1011	1017	parallel
Strand 8	C	1041	1044	parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	863	867	first strand
Strand 2	C	975	979	anti-parallel
Strand 3	C	885	894	anti-parallel
Strand 4	C	949	957	anti-parallel
Strand 5	C	932	939	anti-parallel
Strand 6	C	922	927	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	899	905	first strand
Strand 2	C	960	970	anti-parallel
Strand 3	C	874	881	anti-parallel
Strand 4	C	990	992	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	612	613	first strand
Strand 2	D	619	622	anti-parallel
Strand 3	D	589	593	anti-parallel
Strand 4	D	642	645	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	796	797	first strand
Strand 2	D	648	651	anti-parallel
Strand 3	D	825	826	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	654	657	first strand
Strand 2	D	1056	1061	anti-parallel
Strand 3	D	1048	1052	anti-parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	732	735	first strand
Strand 2	D	712	717	anti-parallel
Strand 3	D	783	788	parallel
Strand 4	D	688	693	parallel
Strand 5	D	819	823	parallel
Strand 6	D	848	853	parallel
Strand 7	D	1011	1017	parallel
Strand 8	D	1022	1023	anti-parallel

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There are 8 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	732	735	first strand
Strand 2	D	712	717	anti-parallel
Strand 3	D	783	788	parallel
Strand 4	D	688	693	parallel
Strand 5	D	819	823	parallel
Strand 6	D	848	853	parallel
Strand 7	D	1011	1017	parallel
Strand 8	D	1041	1044	parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	863	867	first strand
Strand 2	D	975	979	anti-parallel
Strand 3	D	885	894	anti-parallel
Strand 4	D	948	957	anti-parallel
Strand 5	D	932	939	anti-parallel
Strand 6	D	922	927	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	899	905	first strand
Strand 2	D	960	970	anti-parallel
Strand 3	D	874	881	anti-parallel
Strand 4	D	991	992	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	612	613	first strand
Strand 2	F	619	622	anti-parallel
Strand 3	F	589	594	anti-parallel
Strand 4	F	640	645	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	796	797	first strand
Strand 2	F	648	651	anti-parallel
Strand 3	F	825	826	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	654	657	first strand
Strand 2	F	1056	1061	anti-parallel
Strand 3	F	1048	1052	anti-parallel

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There are 8 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	732	735	first strand
Strand 2	F	712	717	anti-parallel
Strand 3	F	783	788	parallel
Strand 4	F	688	693	parallel
Strand 5	F	819	823	parallel
Strand 6	F	848	853	parallel
Strand 7	F	1011	1017	parallel
Strand 8	F	1022	1023	anti-parallel

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There are 8 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	732	735	first strand
Strand 2	F	712	717	anti-parallel
Strand 3	F	783	788	parallel
Strand 4	F	688	693	parallel
Strand 5	F	819	823	parallel
Strand 6	F	848	853	parallel
Strand 7	F	1011	1017	parallel
Strand 8	F	1041	1044	parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	863	867	first strand
Strand 2	F	975	979	anti-parallel
Strand 3	F	885	894	anti-parallel
Strand 4	F	948	957	anti-parallel
Strand 5	F	932	939	anti-parallel
Strand 6	F	920	927	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	899	905	first strand
Strand 2	F	960	970	anti-parallel
Strand 3	F	874	881	anti-parallel
Strand 4	F	991	992	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9T7M

Analysis of interatomic Contacts of Structural Units in PDB entry:
9T7M