Analysis of interatomic Contacts of Structural Units in PDB entry:
9T8I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9T8I entry

There is 1 chain in PDB entry 9T8I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ARG 345	ARG 5148

There are246 helices in PDB entry 9T8I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	358	361	Right-handed 310
Helix 2	AA2	B	375	378	Right-handed 310
Helix 3	AA3	B	395	397	Right-handed 310
Helix 4	AA4	B	410	412	Right-handed 310
Helix 5	AA5	B	456	460	Right-handed 310
Helix 6	AA6	B	489	514	Right-handed alpha
Helix 7	AA7	B	517	537	Right-handed alpha
Helix 8	AA8	B	549	552	Right-handed 310
Helix 9	AA9	B	554	575	Right-handed alpha
Helix 10	AB1	B	578	582	Right-handed 310
Helix 11	AB2	B	590	605	Right-handed alpha
Helix 12	AB3	B	610	622	Right-handed alpha
Helix 13	AB4	B	627	640	Right-handed alpha
Helix 14	AB5	B	641	659	Right-handed alpha
Helix 15	AB6	B	663	674	Right-handed alpha
Helix 16	AB7	B	680	684	Right-handed 310
Helix 17	AB8	B	688	694	Right-handed alpha
Helix 18	AB9	B	711	720	Right-handed alpha
Helix 19	AC1	B	721	726	Right-handed 310
Helix 20	AC2	B	727	736	Right-handed alpha
Helix 21	AC3	B	739	741	Right-handed 310
Helix 22	AC4	B	742	750	Right-handed alpha
Helix 23	AC5	B	750	755	Right-handed alpha
Helix 24	AC6	B	757	759	Right-handed 310
Helix 25	AC7	B	760	770	Right-handed alpha
Helix 26	AC8	B	771	775	Right-handed 310
Helix 27	AC9	B	780	802	Right-handed alpha
Helix 28	AD1	B	803	807	Right-handed 310
Helix 29	AD2	B	810	829	Right-handed alpha
Helix 30	AD3	B	831	834	Right-handed 310
Helix 31	AD4	B	835	852	Right-handed alpha
Helix 32	AD5	B	864	889	Right-handed alpha
Helix 33	AD6	B	907	917	Right-handed alpha
Helix 34	AD7	B	921	924	Right-handed 310
Helix 35	AD8	B	925	940	Right-handed alpha
Helix 36	AD9	B	942	952	Right-handed alpha
Helix 37	AE1	B	962	983	Right-handed alpha
Helix 38	AE2	B	994	1010	Right-handed alpha
Helix 39	AE3	B	1020	1031	Right-handed alpha
Helix 40	AE4	B	1031	1044	Right-handed alpha
Helix 41	AE5	B	1045	1050	Right-handed alpha
Helix 42	AE6	B	1052	1076	Right-handed alpha
Helix 43	AE7	B	1079	1089	Right-handed alpha
Helix 44	AE8	B	1089	1104	Right-handed alpha
Helix 45	AE9	B	1112	1144	Right-handed alpha
Helix 46	AF1	B	1154	1161	Right-handed alpha
Helix 47	AF2	B	1167	1171	Right-handed 310
Helix 48	AF3	B	1190	1204	Right-handed alpha
Helix 49	AF4	B	1206	1223	Right-handed alpha
Helix 50	AF5	B	1233	1241	Right-handed alpha
Helix 51	AF6	B	1241	1259	Right-handed alpha
Helix 52	AF7	B	1262	1270	Right-handed alpha
Helix 53	AF8	B	1271	1274	Right-handed 310
Helix 54	AF9	B	1276	1289	Right-handed alpha
Helix 55	AG1	B	1296	1330	Right-handed alpha
Helix 56	AG2	B	1335	1337	Right-handed 310
Helix 57	AG3	B	1338	1352	Right-handed alpha
Helix 58	AG4	B	1355	1359	Right-handed 310
Helix 59	AG5	B	1361	1370	Right-handed alpha
Helix 60	AG6	B	1374	1387	Right-handed alpha
Helix 61	AG7	B	1387	1398	Right-handed alpha
Helix 62	AG8	B	1400	1415	Right-handed alpha
Helix 63	AG9	B	1418	1440	Right-handed alpha
Helix 64	AH1	B	1447	1464	Right-handed alpha
Helix 65	AH2	B	1467	1478	Right-handed alpha
Helix 66	AH3	B	1478	1486	Right-handed alpha
Helix 67	AH4	B	1495	1507	Right-handed alpha
Helix 68	AH5	B	1521	1525	Right-handed alpha
Helix 69	AH6	B	1544	1558	Right-handed alpha
Helix 70	AH7	B	1563	1594	Right-handed alpha
Helix 71	AH8	B	1630	1660	Right-handed alpha
Helix 72	AH9	B	1661	1666	Right-handed 310
Helix 73	AI1	B	1667	1679	Right-handed alpha
Helix 74	AI2	B	1684	1692	Right-handed alpha
Helix 75	AI3	B	1699	1711	Right-handed alpha
Helix 76	AI4	B	1712	1732	Right-handed alpha
Helix 77	AI5	B	1735	1755	Right-handed alpha
Helix 78	AI6	B	1760	1776	Right-handed alpha
Helix 79	AI7	B	1798	1800	Right-handed 310
Helix 80	AI8	B	1801	1812	Right-handed alpha
Helix 81	AI9	B	1832	1845	Right-handed alpha
Helix 82	AJ1	B	1859	1862	Right-handed 310
Helix 83	AJ2	B	1863	1880	Right-handed alpha
Helix 84	AJ3	B	1895	1897	Right-handed 310
Helix 85	AJ4	B	1899	1905	Right-handed alpha
Helix 86	AJ5	B	1906	1909	Right-handed 310
Helix 87	AJ6	B	1917	1930	Right-handed alpha
Helix 88	AJ7	B	1937	1942	Right-handed 310
Helix 89	AJ8	B	1959	1976	Right-handed alpha
Helix 90	AJ9	B	1993	2002	Right-handed alpha
Helix 91	AK1	B	2003	2005	Right-handed 310
Helix 92	AK2	B	2006	2011	Right-handed alpha
Helix 93	AK3	B	2027	2037	Right-handed alpha
Helix 94	AK4	B	2080	2086	Right-handed alpha
Helix 95	AK5	B	2095	2103	Right-handed alpha
Helix 96	AK6	B	2116	2122	Right-handed alpha
Helix 97	AK7	B	2122	2137	Right-handed alpha
Helix 98	AK8	B	2154	2166	Right-handed alpha
Helix 99	AK9	B	2172	2193	Right-handed alpha
Helix 100	AL1	B	2207	2224	Right-handed alpha
Helix 101	AL2	B	2250	2255	Right-handed alpha
Helix 102	AL3	B	2309	2318	Right-handed alpha
Helix 103	AL4	B	2325	2329	Right-handed 310
Helix 104	AL5	B	2330	2343	Right-handed alpha
Helix 105	AL6	B	2357	2374	Right-handed alpha
Helix 106	AL7	B	2386	2400	Right-handed alpha
Helix 107	AL8	B	2417	2440	Right-handed alpha
Helix 108	AL9	B	2450	2454	Right-handed 310
Helix 109	AM1	B	2455	2464	Right-handed alpha
Helix 110	AM2	B	2492	2501	Right-handed alpha
Helix 111	AM3	B	2523	2525	Right-handed 310
Helix 112	AM4	B	2533	2540	Right-handed 310
Helix 113	AM5	B	2547	2563	Right-handed alpha
Helix 114	AM6	B	2569	2589	Right-handed alpha
Helix 115	AM7	B	2598	2615	Right-handed alpha
Helix 116	AM8	B	2615	2630	Right-handed alpha
Helix 117	AM9	B	2632	2636	Right-handed 310
Helix 118	AN1	B	2640	2654	Right-handed alpha
Helix 119	AN2	B	2660	2670	Right-handed alpha
Helix 120	AN3	B	2678	2697	Right-handed alpha
Helix 121	AN4	B	2706	2723	Right-handed alpha
Helix 122	AN5	B	2735	2747	Right-handed alpha
Helix 123	AN6	B	2748	2752	Right-handed 310
Helix 124	AN7	B	2754	2759	Right-handed alpha
Helix 125	AN8	B	2775	2791	Right-handed alpha
Helix 126	AN9	B	2806	2811	Right-handed alpha
Helix 127	AO1	B	2816	2819	Right-handed 310
Helix 128	AO2	B	2820	2828	Right-handed alpha
Helix 129	AO3	B	2835	2839	Right-handed 310
Helix 130	AO4	B	2851	2856	Right-handed 310
Helix 131	AO5	B	2867	2880	Right-handed alpha
Helix 132	AO6	B	2882	2890	Right-handed alpha
Helix 133	AO7	B	2892	2907	Right-handed alpha
Helix 134	AO8	B	2913	2932	Right-handed alpha
Helix 135	AO9	B	2936	2949	Right-handed alpha
Helix 136	AP1	B	2955	2963	Right-handed alpha
Helix 137	AP2	B	2964	2968	Right-handed 310
Helix 138	AP3	B	2974	2984	Right-handed alpha
Helix 139	AP4	B	3010	3019	Right-handed alpha
Helix 140	AP5	B	3037	3056	Right-handed alpha
Helix 141	AP6	B	3063	3077	Right-handed alpha
Helix 142	AP7	B	3113	3119	Right-handed alpha
Helix 143	AP8	B	3121	3128	Right-handed alpha
Helix 144	AP9	B	3134	3139	Right-handed alpha
Helix 145	AQ1	B	3140	3159	Right-handed alpha
Helix 146	AQ2	B	3172	3177	Right-handed alpha
Helix 147	AQ3	B	3183	3197	Right-handed alpha
Helix 148	AQ4	B	3202	3219	Right-handed alpha
Helix 149	AQ5	B	3222	3229	Right-handed alpha
Helix 150	AQ6	B	3230	3232	Right-handed 310
Helix 151	AQ7	B	3234	3249	Right-handed alpha
Helix 152	AQ8	B	3254	3265	Right-handed alpha
Helix 153	AQ9	B	3285	3296	Right-handed alpha
Helix 154	AR1	B	3309	3311	Right-handed 310
Helix 155	AR2	B	3313	3327	Right-handed alpha
Helix 156	AR3	B	3345	3365	Right-handed alpha
Helix 157	AR4	B	3383	3388	Right-handed alpha
Helix 158	AR5	B	3413	3419	Right-handed alpha
Helix 159	AR6	B	3421	3426	Right-handed alpha
Helix 160	AR7	B	3471	3475	Right-handed alpha
Helix 161	AR8	B	3476	3491	Right-handed alpha
Helix 162	AR9	B	3501	3513	Right-handed alpha
Helix 163	AS1	B	3517	3541	Right-handed alpha
Helix 164	AS2	B	3543	3548	Right-handed alpha
Helix 165	AS3	B	3548	3555	Right-handed alpha
Helix 166	AS4	B	3556	3564	Right-handed alpha
Helix 167	AS5	B	3565	3590	Right-handed alpha
Helix 168	AS6	B	3591	3593	Right-handed 310
Helix 169	AS7	B	3594	3600	Right-handed alpha
Helix 170	AS8	B	3604	3616	Right-handed alpha
Helix 171	AS9	B	3657	3676	Right-handed alpha
Helix 172	AT1	B	3680	3692	Right-handed alpha
Helix 173	AT2	B	3692	3700	Right-handed alpha
Helix 174	AT3	B	3702	3722	Right-handed alpha
Helix 175	AT4	B	3726	3748	Right-handed alpha
Helix 176	AT5	B	3761	3771	Right-handed alpha
Helix 177	AT6	B	3771	3785	Right-handed alpha
Helix 178	AT7	B	3787	3795	Right-handed alpha
Helix 179	AT8	B	3807	3823	Right-handed alpha
Helix 180	AT9	B	3828	3848	Right-handed alpha
Helix 181	AU1	B	3856	3883	Right-handed alpha
Helix 182	AU2	B	3883	3891	Right-handed alpha
Helix 183	AU3	B	3894	3911	Right-handed alpha
Helix 184	AU4	B	3917	3940	Right-handed alpha
Helix 185	AU5	B	3968	3974	Right-handed alpha
Helix 186	AU6	B	3998	4026	Right-handed alpha
Helix 187	AU7	B	4035	4047	Right-handed alpha
Helix 188	AU8	B	4082	4090	Right-handed alpha
Helix 189	AU9	B	4092	4111	Right-handed alpha
Helix 190	AV1	B	4117	4139	Right-handed alpha
Helix 191	AV2	B	4142	4157	Right-handed alpha
Helix 192	AV3	B	4171	4197	Right-handed alpha
Helix 193	AV4	B	4202	4219	Right-handed alpha
Helix 194	AV5	B	4222	4245	Right-handed alpha
Helix 195	AV6	B	4249	4255	Right-handed 310
Helix 196	AV7	B	4256	4263	Right-handed alpha
Helix 197	AV8	B	4271	4276	Right-handed 310
Helix 198	AV9	B	4277	4294	Right-handed alpha
Helix 199	AW1	B	4296	4306	Right-handed alpha
Helix 200	AW2	B	4309	4330	Right-handed alpha
Helix 201	AW3	B	4342	4353	Right-handed alpha
Helix 202	AW4	B	4358	4370	Right-handed alpha
Helix 203	AW5	B	4373	4378	Right-handed 310
Helix 204	AW6	B	4382	4403	Right-handed alpha
Helix 205	AW7	B	4405	4407	Right-handed 310
Helix 206	AW8	B	4408	4416	Right-handed alpha
Helix 207	AW9	B	4417	4422	Right-handed 310
Helix 208	AX1	B	4522	4544	Right-handed alpha
Helix 209	AX2	B	4544	4552	Right-handed alpha
Helix 210	AX3	B	4558	4579	Right-handed alpha
Helix 211	AX4	B	4581	4599	Right-handed alpha
Helix 212	AX5	B	4613	4634	Right-handed alpha
Helix 213	AX6	B	4634	4648	Right-handed alpha
Helix 214	AX7	B	4649	4654	Right-handed alpha
Helix 215	AX8	B	4655	4662	Right-handed alpha
Helix 216	AX9	B	4665	4669	Right-handed 310
Helix 217	AY1	B	4691	4702	Right-handed alpha
Helix 218	AY2	B	4703	4708	Right-handed alpha
Helix 219	AY3	B	4708	4717	Right-handed alpha
Helix 220	AY4	B	4717	4722	Right-handed alpha
Helix 221	AY5	B	4723	4725	Right-handed 310
Helix 222	AY6	B	4726	4741	Right-handed alpha
Helix 223	AY7	B	4751	4758	Right-handed alpha
Helix 224	AY8	B	4761	4789	Right-handed alpha
Helix 225	AY9	B	4797	4801	Right-handed 310
Helix 226	AZ1	B	4808	4812	Right-handed 310
Helix 227	AZ2	B	4817	4819	Right-handed 310
Helix 228	AZ3	B	4820	4845	Right-handed alpha
Helix 229	AZ4	B	4856	4858	Right-handed 310
Helix 230	AZ5	B	4859	4863	Right-handed 310
Helix 231	AZ6	B	4871	4879	Right-handed alpha
Helix 232	AZ7	B	4895	4907	Right-handed alpha
Helix 233	AZ8	B	4929	4941	Right-handed alpha
Helix 234	AZ9	B	4947	4958	Right-handed alpha
Helix 235	BA1	B	4960	4981	Right-handed alpha
Helix 236	BA2	B	4988	4995	Right-handed alpha
Helix 237	BA3	B	5003	5010	Right-handed alpha
Helix 238	BA4	B	5014	5016	Right-handed 310
Helix 239	BA5	B	5017	5036	Right-handed alpha
Helix 240	BA6	B	5045	5049	Right-handed 310
Helix 241	BA7	B	5053	5065	Right-handed alpha
Helix 242	BA8	B	5068	5083	Right-handed alpha
Helix 243	BA9	B	5098	5109	Right-handed alpha
Helix 244	BB1	B	5114	5122	Right-handed alpha
Helix 245	BB2	B	5127	5129	Right-handed 310
Helix 246	BB3	B	5130	5148	Right-handed alpha

There are 24 sheets in PDB entry 9T8I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	434	first strand
Strand 2	B	416	423	anti-parallel
Strand 3	B	368	373	anti-parallel
Strand 4	B	386	393	anti-parallel
Strand 5	B	399	408	anti-parallel
Strand 6	B	347	356	anti-parallel
Strand 7	B	463	471	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	434	first strand
Strand 2	B	416	423	anti-parallel
Strand 3	B	449	452	anti-parallel
Strand 4	B	539	541	anti-parallel
Strand 5	B	545	547	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	894	895	first strand
Strand 2	B	902	903	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1149	1150	first strand
Strand 2	B	1231	1232	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1173	1174	first strand
Strand 2	B	1182	1183	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1540	1543	first strand
Strand 2	B	1526	1531	anti-parallel
Strand 3	B	1508	1511	anti-parallel
Strand 4	B	1602	1606	anti-parallel
Strand 5	B	1612	1616	anti-parallel
Strand 6	B	1625	1627	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1794	1797	first strand
Strand 2	B	1887	1893	parallel
Strand 3	B	1853	1857	parallel
Strand 4	B	1824	1826	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1982	1987	first strand
Strand 2	B	2014	2020	parallel
Strand 3	B	2055	2062	parallel
Strand 4	B	1948	1953	parallel
Strand 5	B	2090	2092	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2040	2042	first strand
Strand 2	B	2048	2050	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2266	2270	first strand
Strand 2	B	2275	2279	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2282	2285	first strand
Strand 2	B	2290	2294	anti-parallel
Strand 3	B	2301	2308	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2407	2411	first strand
Strand 2	B	2443	2448	parallel
Strand 3	B	2479	2485	parallel
Strand 4	B	2377	2380	parallel
Strand 5	B	2541	2542	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2467	2468	first strand
Strand 2	B	2471	2472	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2516	2517	first strand
Strand 2	B	2520	2521	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2762	2769	first strand
Strand 2	B	2798	2805	parallel
Strand 3	B	2841	2846	parallel
Strand 4	B	2726	2729	parallel
Strand 5	B	2859	2862	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3026	3028	first strand
Strand 2	B	3059	3061	parallel
Strand 3	B	3107	3112	parallel
Strand 4	B	3002	3006	parallel
Strand 5	B	3129	3132	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3080	3081	first strand
Strand 2	B	3086	3092	anti-parallel
Strand 3	B	3095	3101	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3304	3307	first strand
Strand 2	B	3331	3339	parallel
Strand 3	B	3370	3378	parallel
Strand 4	B	3272	3279	parallel
Strand 5	B	3396	3400	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3492	3494	first strand
Strand 2	B	3639	3641	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3636	3637	first strand
Strand 2	B	4927	4928	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3957	3960	first strand
Strand 2	B	3964	3967	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4079	4081	first strand
Strand 2	B	4880	4885	anti-parallel
Strand 3	B	4890	4894	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4449	4450	first strand
Strand 2	B	4456	4457	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4852	4854	first strand
Strand 2	B	4913	4915	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9T8I

Analysis of interatomic Contacts of Structural Units in PDB entry:
9T8I