Analysis of interatomic Contacts of Structural Units in PDB entry:
9T94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T94 entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 9T94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 797TRP 2549
C
 VAL 8ASP 322
E
 GLU 24ALA 1694
G
 ALA 2GLN 68
G
 VAL 70LEU 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are176 helices in PDB entry 9T94. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
798 810Right-handed alpha
Helix 2
AA2
A
813 825Right-handed alpha
Helix 3
AA3
A
837 852Right-handed alpha
Helix 4
AA4
A
855 861Right-handed alpha
Helix 5
AA5
A
863 872Right-handed alpha
Helix 6
AA6
A
877 892Right-handed alpha
Helix 7
AA7
A
895 902Right-handed alpha
Helix 8
AA8
A
930 937Right-handed 310
Helix 9
AA9
A
942 961Right-handed alpha
Helix 10
AB1
A
962 966Right-handed 310
Helix 11
AB2
A
967 983Right-handed alpha
Helix 12
AB3
A
984 988Right-handed 310
Helix 13
AB4
A
989 1004Right-handed alpha
Helix 14
AB5
A
1005 1024Right-handed alpha
Helix 15
AB6
A
1025 1029Right-handed 310
Helix 16
AB7
A
1030 1042Right-handed alpha
Helix 17
AB8
A
1048 1064Right-handed alpha
Helix 18
AB9
A
1065 1069Right-handed 310
Helix 19
AC1
A
1070 1083Right-handed alpha
Helix 20
AC2
A
1087 1089Right-handed 310
Helix 21
AC3
A
1090 1104Right-handed alpha
Helix 22
AC4
A
1105 1109Right-handed 310
Helix 23
AC5
A
1110 1124Right-handed alpha
Helix 24
AC6
A
1128 1143Right-handed alpha
Helix 25
AC7
A
1148 1150Right-handed 310
Helix 26
AC8
A
1151 1166Right-handed alpha
Helix 27
AC9
A
1169 1185Right-handed alpha
Helix 28
AD1
A
1186 1190Right-handed 310
Helix 29
AD2
A
1191 1202Right-handed alpha
Helix 30
AD3
A
1206 1219Right-handed alpha
Helix 31
AD4
A
1228 1237Right-handed alpha
Helix 32
AD5
A
1262 1270Right-handed alpha
Helix 33
AD6
A
1276 1295Right-handed alpha
Helix 34
AD7
A
1297 1302Right-handed alpha
Helix 35
AD8
A
1303 1310Right-handed alpha
Helix 36
AD9
A
1311 1327Right-handed alpha
Helix 37
AE1
A
1330 1347Right-handed alpha
Helix 38
AE2
A
1350 1367Right-handed alpha
Helix 39
AE3
A
1376 1378Right-handed 310
Helix 40
AE4
A
1379 1390Right-handed alpha
Helix 41
AE5
A
1392 1406Right-handed alpha
Helix 42
AE6
A
1409 1424Right-handed alpha
Helix 43
AE7
A
1425 1440Right-handed alpha
Helix 44
AE8
A
1441 1445Right-handed 310
Helix 45
AE9
A
1446 1453Right-handed alpha
Helix 46
AF1
A
1455 1464Right-handed alpha
Helix 47
AF2
A
1473 1488Right-handed alpha
Helix 48
AF3
A
1489 1501Right-handed alpha
Helix 49
AF4
A
1505 1524Right-handed alpha
Helix 50
AF5
A
1525 1536Right-handed alpha
Helix 51
AF6
A
1540 1554Right-handed alpha
Helix 52
AF7
A
1556 1580Right-handed alpha
Helix 53
AF8
A
1582 1608Right-handed alpha
Helix 54
AF9
A
1611 1624Right-handed alpha
Helix 55
AG1
A
1629 1641Right-handed alpha
Helix 56
AG2
A
1649 1662Right-handed alpha
Helix 57
AG3
A
1665 1678Right-handed alpha
Helix 58
AG4
A
1693 1707Right-handed alpha
Helix 59
AG5
A
1709 1728Right-handed alpha
Helix 60
AG6
A
1739 1763Right-handed alpha
Helix 61
AG7
A
1767 1783Right-handed alpha
Helix 62
AG8
A
1786 1812Right-handed alpha
Helix 63
AG9
A
1874 1894Right-handed alpha
Helix 64
AH1
A
1899 1914Right-handed alpha
Helix 65
AH2
A
1916 1930Right-handed alpha
Helix 66
AH3
A
1931 1937Right-handed 310
Helix 67
AH4
A
1938 1944Right-handed alpha
Helix 68
AH5
A
1950 1968Right-handed alpha
Helix 69
AH6
A
1968 1981Right-handed alpha
Helix 70
AH7
A
1984 1999Right-handed alpha
Helix 71
AH8
A
2002 2021Right-handed alpha
Helix 72
AH9
A
2022 2042Right-handed alpha
Helix 73
AI1
A
2043 2060Right-handed alpha
Helix 74
AI2
A
2064 2092Right-handed alpha
Helix 75
AI3
A
2093 2115Right-handed alpha
Helix 76
AI4
A
2116 2118Right-handed 310
Helix 77
AI5
A
2123 2127Right-handed alpha
Helix 78
AI6
A
2127 2132Right-handed alpha
Helix 79
AI7
A
2192 2211Right-handed alpha
Helix 80
AI8
A
2212 2219Right-handed alpha
Helix 81
AI9
A
2246 2257Right-handed alpha
Helix 82
AJ1
A
2262 2272Right-handed alpha
Helix 83
AJ2
A
2274 2278Right-handed 310
Helix 84
AJ3
A
2279 2293Right-handed alpha
Helix 85
AJ4
A
2297 2306Right-handed alpha
Helix 86
AJ5
A
2309 2335Right-handed alpha
Helix 87
AJ6
A
2363 2368Right-handed alpha
Helix 88
AJ7
A
2380 2386Right-handed alpha
Helix 89
AJ8
A
2394 2410Right-handed alpha
Helix 90
AJ9
A
2410 2423Right-handed alpha
Helix 91
AK1
A
2427 2431Right-handed 310
Helix 92
AK2
A
2495 2508Right-handed alpha
Helix 93
AK3
A
2520 2534Right-handed alpha
Helix 94
AK4
A
2534 2540Right-handed alpha
Helix 95
AK5
A
2542 2546Right-handed 310
Helix 96
AK6
C
264 268Right-handed 310
Helix 97
AK7
E
33 47Right-handed alpha
Helix 98
AK8
E
52 71Right-handed alpha
Helix 99
AK9
E
73 78Right-handed alpha
Helix 100
AL1
E
80 92Right-handed alpha
Helix 101
AL2
E
96 111Right-handed alpha
Helix 102
AL3
E
113 123Right-handed alpha
Helix 103
AL4
E
124 135Right-handed alpha
Helix 104
AL5
E
139 158Right-handed alpha
Helix 105
AL6
E
159 161Right-handed 310
Helix 106
AL7
E
162 176Right-handed alpha
Helix 107
AL8
E
183 198Right-handed alpha
Helix 108
AL9
E
198 205Right-handed alpha
Helix 109
AM1
E
206 218Right-handed alpha
Helix 110
AM2
E
220 237Right-handed alpha
Helix 111
AM3
E
240 244Right-handed 310
Helix 112
AM4
E
249 253Right-handed 310
Helix 113
AM5
E
254 259Right-handed alpha
Helix 114
AM6
E
269 271Right-handed 310
Helix 115
AM7
E
272 293Right-handed alpha
Helix 116
AM8
E
294 302Right-handed alpha
Helix 117
AM9
E
307 317Right-handed alpha
Helix 118
AN1
E
320 335Right-handed alpha
Helix 119
AN2
E
345 352Right-handed alpha
Helix 120
AN3
E
359 363Right-handed 310
Helix 121
AN4
E
367 377Right-handed alpha
Helix 122
AN5
E
386 402Right-handed alpha
Helix 123
AN6
E
403 414Right-handed alpha
Helix 124
AN7
E
416 438Right-handed alpha
Helix 125
AN8
E
439 444Right-handed alpha
Helix 126
AN9
E
445 448Right-handed 310
Helix 127
AO1
E
449 457Right-handed alpha
Helix 128
AO2
E
462 486Right-handed alpha
Helix 129
AO3
E
491 506Right-handed alpha
Helix 130
AO4
E
524 535Right-handed alpha
Helix 131
AO5
E
542 546Right-handed 310
Helix 132
AO6
E
547 557Right-handed alpha
Helix 133
AO7
E
561 566Right-handed alpha
Helix 134
AO8
E
567 582Right-handed alpha
Helix 135
AO9
E
583 586Right-handed 310
Helix 136
AP1
E
597 615Right-handed alpha
Helix 137
AP2
E
619 639Right-handed alpha
Helix 138
AP3
E
649 657Right-handed 310
Helix 139
AP4
E
658 668Right-handed alpha
Helix 140
AP5
E
669 679Right-handed alpha
Helix 141
AP6
E
680 689Right-handed alpha
Helix 142
AP7
E
694 705Right-handed alpha
Helix 143
AP8
E
711 724Right-handed alpha
Helix 144
AP9
E
725 742Right-handed alpha
Helix 145
AQ1
E
746 758Right-handed alpha
Helix 146
AQ2
E
763 778Right-handed alpha
Helix 147
AQ3
E
780 791Right-handed alpha
Helix 148
AQ4
E
794 797Right-handed 310
Helix 149
AQ5
E
798 806Right-handed alpha
Helix 150
AQ6
E
807 810Right-handed 310
Helix 151
AQ7
E
811 821Right-handed alpha
Helix 152
AQ8
E
822 834Right-handed alpha
Helix 153
AQ9
E
834 852Right-handed alpha
Helix 154
AR1
E
881 887Right-handed alpha
Helix 155
AR2
E
889 899Right-handed alpha
Helix 156
AR3
E
900 911Right-handed alpha
Helix 157
AR4
E
916 934Right-handed alpha
Helix 158
AR5
E
936 947Right-handed alpha
Helix 159
AR6
E
948 959Right-handed alpha
Helix 160
AR7
E
961 976Right-handed alpha
Helix 161
AR8
E
978 988Right-handed alpha
Helix 162
AR9
E
1432 1437Right-handed 310
Helix 163
AS1
E
1444 1448Right-handed 310
Helix 164
AS2
E
1481 1485Right-handed alpha
Helix 165
AS3
E
1488 1494Right-handed alpha
Helix 166
AS4
E
1523 1530Right-handed alpha
Helix 167
AS5
E
1606 1624Right-handed alpha
Helix 168
AS6
E
1628 1643Right-handed alpha
Helix 169
AS7
E
1644 1647Right-handed 310
Helix 170
AS8
E
1649 1661Right-handed alpha
Helix 171
AS9
E
1666 1676Right-handed alpha
Helix 172
AT1
E
1682 1693Right-handed alpha
Helix 173
AT2
G
6 22Right-handed alpha
Helix 174
AT3
G
25 31Right-handed alpha
Helix 175
AT4
G
32 37Right-handed 310
Helix 176
AT5
G
119 124Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 9T94. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2120 2122first strand
Strand 2
A
2159 2162anti-parallel
Strand 3
A
2170 2176anti-parallel
Strand 4
A
2153 2156anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2120 2122first strand
Strand 2
A
2159 2162anti-parallel
Strand 3
A
2170 2176anti-parallel
Strand 4
A
2181 2187anti-parallel
Strand 5
A
2234 2238anti-parallel
Strand 6
A
2227 2231anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2243 2245first strand
Strand 2
A
2344 2347anti-parallel
Strand 3
A
2353 2355anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 39first strand
Strand 2
C
23 27anti-parallel
Strand 3
C
14 19anti-parallel
Strand 4
C
315 321anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 50first strand
Strand 2
C
56 60anti-parallel
Strand 3
C
65 69anti-parallel
Strand 4
C
79 82anti-parallel
Strand 5
G
104 107parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
88 93first strand
Strand 2
C
99 104anti-parallel
Strand 3
C
108 113anti-parallel
Strand 4
C
123 126anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 136first strand
Strand 2
C
142 147anti-parallel
Strand 3
C
152 156anti-parallel
Strand 4
C
162 165anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
173 178first strand
Strand 2
C
184 189anti-parallel
Strand 3
C
194 201anti-parallel
Strand 4
C
209 216anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
223 228first strand
Strand 2
C
234 239anti-parallel
Strand 3
C
243 248anti-parallel
Strand 4
C
254 259anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
275 278first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
293 298anti-parallel
Strand 4
C
304 307anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
990 992first strand
Strand 2
E
1428 1430anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il