Analysis of interatomic Contacts of Structural Units in PDB entry:
9T99


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9T99 entry

There is 1 chain in PDB entry 9T99 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 290ALA 939
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9T99. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
294 306Right-handed alpha
Helix 2
AA2
A
319 338Right-handed alpha
Helix 3
AA3
A
350 352Right-handed 310
Helix 4
AA4
A
353 364Right-handed alpha
Helix 5
AA5
A
381 386Right-handed alpha
Helix 6
AA6
A
395 405Right-handed alpha
Helix 7
AA7
A
406 408Right-handed 310
Helix 8
AA8
A
420 424Right-handed 310
Helix 9
AA9
A
432 435Right-handed 310
Helix 10
AB1
A
439 455Right-handed alpha
Helix 11
AB2
A
480 496Right-handed alpha
Helix 12
AB3
A
506 514Right-handed alpha
Helix 13
AB4
A
530 557Right-handed alpha
Helix 14
AB5
A
589 606Right-handed alpha
Helix 15
AB6
A
612 637Right-handed alpha
Helix 16
AB7
A
638 653Right-handed alpha
Helix 17
AB8
A
654 657Right-handed 310
Helix 18
AB9
A
658 670Right-handed alpha
Helix 19
AC1
A
680 697Right-handed alpha
Helix 20
AC2
A
708 721Right-handed alpha
Helix 21
AC3
A
722 729Right-handed alpha
Helix 22
AC4
A
752 765Right-handed alpha
Helix 23
AC5
A
774 778Right-handed 310
Helix 24
AC6
A
796 804Right-handed alpha
Helix 25
AC7
A
820 847Right-handed alpha
Helix 26
AC8
A
847 884Right-handed alpha
Helix 27
AC9
A
915 920Right-handed 310
Helix 28
AD1
A
928 935Right-handed alpha
Helix 29
AD2
A
988 996Right-handed alpha
Helix 30
AD3
A
1003 1014Right-handed alpha
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There are 5 sheets in PDB entry 9T99. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 374first strand
Strand 2
A
391 394parallel
Strand 3
A
344 347parallel
Strand 4
A
426 430parallel
Strand 5
A
465 470parallel
Strand 6
A
310 313parallel
Strand 7
A
499 501parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
519 523first strand
Strand 2
A
813 818parallel
Strand 3
A
787 791parallel
Strand 4
A
702 705parallel
Strand 5
A
769 772parallel
Strand 6
A
732 735parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
897 900first strand
Strand 2
A
887 891anti-parallel
Strand 3
A
973 977anti-parallel
Strand 4
A
983 984anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
910 913first strand
Strand 2
A
904 907anti-parallel
Strand 3
A
1000 1001parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
922 926first strand
Strand 2
A
941 945anti-parallel
Strand 3
A
953 960anti-parallel
Strand 4
A
963 968anti-parallel
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