Analysis of interatomic Contacts of Structural Units in PDB entry:
9TAM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TAM entry

There are 13 chains in PDB entry 9TAM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	GLU 12	ARG 600
E	ALA 11	LYS 166
F	ILE 4	LYS 442
G	ALA 4	ALA 908
I	MET 32	PRO 180
J	MET 1	ARG 163
K	MET 1	GLY 100
L	MET 1	ARG 613
M	MET 1	VAL 504
N	MET 1	MET 485
B	ASP 2	ILE 220
H	ILE 4	GLN 325
A	SER 6	THR 126

There are210 helices in PDB entry 9TAM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	23	34	Right-handed alpha
Helix 2	AA2	C	56	66	Right-handed alpha
Helix 3	AA3	C	133	146	Right-handed alpha
Helix 4	AA4	C	187	192	Right-handed alpha
Helix 5	AA5	C	255	260	Right-handed alpha
Helix 6	AA6	C	268	274	Right-handed alpha
Helix 7	AA7	C	280	296	Right-handed alpha
Helix 8	AA8	C	300	330	Right-handed alpha
Helix 9	AA9	C	335	355	Right-handed alpha
Helix 10	AB1	C	375	398	Right-handed alpha
Helix 11	AB2	C	401	409	Right-handed alpha
Helix 12	AB3	C	415	423	Right-handed alpha
Helix 13	AB4	C	426	431	Right-handed alpha
Helix 14	AB5	C	437	442	Right-handed alpha
Helix 15	AB6	C	446	450	Right-handed 310
Helix 16	AB7	C	462	487	Right-handed alpha
Helix 17	AB8	C	504	509	Right-handed alpha
Helix 18	AB9	C	511	524	Right-handed alpha
Helix 19	AC1	C	563	577	Right-handed alpha
Helix 20	AC2	C	581	591	Right-handed alpha
Helix 21	AC3	C	594	600	Right-handed alpha
Helix 22	AC4	E	15	27	Right-handed alpha
Helix 23	AC5	E	31	34	Right-handed 310
Helix 24	AC6	E	35	48	Right-handed alpha
Helix 25	AC7	E	51	63	Right-handed alpha
Helix 26	AC8	E	65	76	Right-handed alpha
Helix 27	AC9	E	94	101	Right-handed alpha
Helix 28	AD1	E	101	114	Right-handed alpha
Helix 29	AD2	E	136	140	Right-handed 310
Helix 30	AD3	E	157	164	Right-handed alpha
Helix 31	AD4	F	13	17	Right-handed 310
Helix 32	AD5	F	25	31	Right-handed alpha
Helix 33	AD6	F	35	45	Right-handed alpha
Helix 34	AD7	F	46	58	Right-handed alpha
Helix 35	AD8	F	68	75	Right-handed alpha
Helix 36	AD9	F	99	108	Right-handed alpha
Helix 37	AE1	F	108	124	Right-handed alpha
Helix 38	AE2	F	136	153	Right-handed alpha
Helix 39	AE3	F	159	163	Right-handed 310
Helix 40	AE4	F	177	181	Right-handed 310
Helix 41	AE5	F	182	191	Right-handed alpha
Helix 42	AE6	F	208	212	Right-handed 310
Helix 43	AE7	F	219	232	Right-handed alpha
Helix 44	AE8	F	232	238	Right-handed alpha
Helix 45	AE9	F	269	276	Right-handed alpha
Helix 46	AF1	F	301	306	Right-handed 310
Helix 47	AF2	F	310	316	Right-handed alpha
Helix 48	AF3	F	334	349	Right-handed alpha
Helix 49	AF4	F	354	373	Right-handed alpha
Helix 50	AF5	F	379	391	Right-handed alpha
Helix 51	AF6	F	399	415	Right-handed alpha
Helix 52	AF7	F	415	421	Right-handed alpha
Helix 53	AF8	G	20	28	Right-handed alpha
Helix 54	AF9	G	83	99	Right-handed alpha
Helix 55	AG1	G	104	108	Right-handed 310
Helix 56	AG2	G	114	123	Right-handed alpha
Helix 57	AG3	G	150	153	Right-handed 310
Helix 58	AG4	G	157	164	Right-handed alpha
Helix 59	AG5	G	177	181	Right-handed 310
Helix 60	AG6	G	195	197	Right-handed 310
Helix 61	AG7	G	198	203	Right-handed alpha
Helix 62	AG8	G	211	216	Right-handed alpha
Helix 63	AG9	G	219	223	Right-handed 310
Helix 64	AH1	G	265	271	Right-handed alpha
Helix 65	AH2	G	272	277	Right-handed 310
Helix 66	AH3	G	296	310	Right-handed alpha
Helix 67	AH4	G	323	335	Right-handed alpha
Helix 68	AH5	G	344	360	Right-handed alpha
Helix 69	AH6	G	369	374	Right-handed 310
Helix 70	AH7	G	383	388	Right-handed alpha
Helix 71	AH8	G	388	400	Right-handed alpha
Helix 72	AH9	G	400	410	Right-handed alpha
Helix 73	AI1	G	416	425	Right-handed alpha
Helix 74	AI2	G	452	468	Right-handed alpha
Helix 75	AI3	G	478	494	Right-handed alpha
Helix 76	AI4	G	508	525	Right-handed alpha
Helix 77	AI5	G	539	547	Right-handed alpha
Helix 78	AI6	G	550	561	Right-handed alpha
Helix 79	AI7	G	578	589	Right-handed alpha
Helix 80	AI8	G	600	605	Right-handed 310
Helix 81	AI9	G	614	618	Right-handed 310
Helix 82	AJ1	G	649	664	Right-handed alpha
Helix 83	AJ2	G	670	682	Right-handed alpha
Helix 84	AJ3	G	683	691	Right-handed 310
Helix 85	AJ4	G	763	771	Right-handed 310
Helix 86	AJ5	G	824	829	Right-handed alpha
Helix 87	AJ6	G	832	837	Right-handed alpha
Helix 88	AJ7	G	845	853	Right-handed alpha
Helix 89	AJ8	G	894	898	Right-handed 310
Helix 90	AJ9	I	64	70	Right-handed alpha
Helix 91	AK1	I	103	109	Right-handed alpha
Helix 92	AK2	I	126	129	Right-handed 310
Helix 93	AK3	I	133	138	Right-handed alpha
Helix 94	AK4	J	2	20	Right-handed alpha
Helix 95	AK5	J	24	47	Right-handed alpha
Helix 96	AK6	J	48	58	Right-handed alpha
Helix 97	AK7	J	62	73	Right-handed alpha
Helix 98	AK8	J	74	76	Right-handed 310
Helix 99	AK9	J	79	85	Right-handed alpha
Helix 100	AL1	J	86	88	Right-handed 310
Helix 101	AL2	J	89	113	Right-handed alpha
Helix 102	AL3	J	125	134	Right-handed alpha
Helix 103	AL4	J	137	159	Right-handed alpha
Helix 104	AL5	K	3	25	Right-handed alpha
Helix 105	AL6	K	27	54	Right-handed alpha
Helix 106	AL7	K	56	88	Right-handed alpha
Helix 107	AL8	K	91	95	Right-handed 310
Helix 108	AL9	L	5	20	Right-handed alpha
Helix 109	AM1	L	26	56	Right-handed alpha
Helix 110	AM2	L	82	107	Right-handed alpha
Helix 111	AM3	L	112	133	Right-handed alpha
Helix 112	AM4	L	135	155	Right-handed alpha
Helix 113	AM5	L	160	193	Right-handed alpha
Helix 114	AM6	L	203	208	Right-handed alpha
Helix 115	AM7	L	214	229	Right-handed alpha
Helix 116	AM8	L	236	242	Right-handed alpha
Helix 117	AM9	L	246	254	Right-handed alpha
Helix 118	AN1	L	260	268	Right-handed alpha
Helix 119	AN2	L	269	275	Right-handed alpha
Helix 120	AN3	L	276	299	Right-handed alpha
Helix 121	AN4	L	305	317	Right-handed alpha
Helix 122	AN5	L	317	325	Right-handed alpha
Helix 123	AN6	L	327	337	Right-handed alpha
Helix 124	AN7	L	339	356	Right-handed alpha
Helix 125	AN8	L	361	365	Right-handed 310
Helix 126	AN9	L	367	371	Right-handed 310
Helix 127	AO1	L	372	388	Right-handed alpha
Helix 128	AO2	L	395	410	Right-handed alpha
Helix 129	AO3	L	412	429	Right-handed alpha
Helix 130	AO4	L	432	437	Right-handed alpha
Helix 131	AO5	L	453	464	Right-handed alpha
Helix 132	AO6	L	486	513	Right-handed alpha
Helix 133	AO7	L	525	537	Right-handed alpha
Helix 134	AO8	L	540	549	Right-handed alpha
Helix 135	AO9	L	549	561	Right-handed alpha
Helix 136	AP1	L	563	569	Right-handed alpha
Helix 137	AP2	L	570	584	Right-handed alpha
Helix 138	AP3	L	585	587	Right-handed 310
Helix 139	AP4	L	590	613	Right-handed alpha
Helix 140	AP5	M	3	6	Right-handed 310
Helix 141	AP6	M	7	18	Right-handed alpha
Helix 142	AP7	M	20	24	Right-handed 310
Helix 143	AP8	M	26	51	Right-handed alpha
Helix 144	AP9	M	52	55	Right-handed 310
Helix 145	AQ1	M	84	105	Right-handed alpha
Helix 146	AQ2	M	112	133	Right-handed alpha
Helix 147	AQ3	M	135	146	Right-handed alpha
Helix 148	AQ4	M	146	156	Right-handed alpha
Helix 149	AQ5	M	163	201	Right-handed alpha
Helix 150	AQ6	M	216	234	Right-handed alpha
Helix 151	AQ7	M	242	250	Right-handed alpha
Helix 152	AQ8	M	265	275	Right-handed alpha
Helix 153	AQ9	M	279	307	Right-handed alpha
Helix 154	AR1	M	310	331	Right-handed alpha
Helix 155	AR2	M	334	367	Right-handed alpha
Helix 156	AR3	M	383	396	Right-handed alpha
Helix 157	AR4	M	403	416	Right-handed alpha
Helix 158	AR5	M	418	444	Right-handed alpha
Helix 159	AR6	M	461	481	Right-handed alpha
Helix 160	AR7	M	482	489	Right-handed alpha
Helix 161	AR8	M	489	502	Right-handed alpha
Helix 162	AR9	N	8	10	Right-handed 310
Helix 163	AS1	N	11	31	Right-handed alpha
Helix 164	AS2	N	33	51	Right-handed alpha
Helix 165	AS3	N	51	59	Right-handed alpha
Helix 166	AS4	N	70	97	Right-handed alpha
Helix 167	AS5	N	103	122	Right-handed alpha
Helix 168	AS6	N	124	144	Right-handed alpha
Helix 169	AS7	N	149	182	Right-handed alpha
Helix 170	AS8	N	185	193	Right-handed 310
Helix 171	AS9	N	200	218	Right-handed alpha
Helix 172	AT1	N	226	234	Right-handed alpha
Helix 173	AT2	N	235	261	Right-handed alpha
Helix 174	AT3	N	262	265	Right-handed 310
Helix 175	AT4	N	266	288	Right-handed alpha
Helix 176	AT5	N	293	315	Right-handed alpha
Helix 177	AT6	N	321	348	Right-handed alpha
Helix 178	AT7	N	353	357	Right-handed 310
Helix 179	AT8	N	364	368	Right-handed 310
Helix 180	AT9	N	369	384	Right-handed alpha
Helix 181	AU1	N	389	405	Right-handed alpha
Helix 182	AU2	N	407	431	Right-handed alpha
Helix 183	AU3	N	432	434	Right-handed 310
Helix 184	AU4	N	447	470	Right-handed alpha
Helix 185	AU5	N	471	481	Right-handed alpha
Helix 186	AU6	B	35	52	Right-handed alpha
Helix 187	AU7	B	62	66	Right-handed 310
Helix 188	AU8	B	67	72	Right-handed alpha
Helix 189	AU9	B	106	117	Right-handed alpha
Helix 190	AV1	B	127	133	Right-handed alpha
Helix 191	AV2	B	144	148	Right-handed 310
Helix 192	AV3	B	161	178	Right-handed alpha
Helix 193	AV4	B	199	210	Right-handed alpha
Helix 194	AV5	H	5	37	Right-handed alpha
Helix 195	AV6	H	55	69	Right-handed alpha
Helix 196	AV7	H	79	97	Right-handed alpha
Helix 197	AV8	H	98	101	Right-handed 310
Helix 198	AV9	H	115	137	Right-handed alpha
Helix 199	AW1	H	139	157	Right-handed alpha
Helix 200	AW2	H	159	164	Right-handed alpha
Helix 201	AW3	H	164	172	Right-handed alpha
Helix 202	AW4	H	175	183	Right-handed alpha
Helix 203	AW5	H	192	207	Right-handed alpha
Helix 204	AW6	H	231	257	Right-handed alpha
Helix 205	AW7	H	266	289	Right-handed alpha
Helix 206	AW8	H	293	304	Right-handed alpha
Helix 207	AW9	H	304	325	Right-handed alpha
Helix 208	AX1	A	7	36	Right-handed alpha
Helix 209	AX2	A	66	90	Right-handed alpha
Helix 210	AX3	A	91	120	Right-handed alpha

There are 27 sheets in PDB entry 9TAM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	41	first strand
Strand 2	C	49	52	anti-parallel
Strand 3	C	109	117	parallel
Strand 4	C	96	104	anti-parallel
Strand 5	C	73	81	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	123	125	first strand
Strand 2	C	148	150	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	219	first strand
Strand 2	C	232	236	anti-parallel
Strand 3	C	244	248	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	242	first strand
Strand 2	C	579	580	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	363	364	first strand
Strand 2	C	367	368	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	531	538	first strand
Strand 2	C	543	550	anti-parallel
Strand 3	C	558	562	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	131	first strand
Strand 2	E	87	92	parallel
Strand 3	E	143	145	anti-parallel
Strand 4	E	148	150	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	173	first strand
Strand 2	F	127	132	parallel
Strand 3	F	86	91	parallel
Strand 4	F	214	218	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	260	265	first strand
Strand 2	F	247	253	anti-parallel
Strand 3	F	325	330	parallel
Strand 4	F	287	291	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	14	first strand
Strand 2	G	5	8	anti-parallel
Strand 3	G	77	80	parallel
Strand 4	G	51	55	anti-parallel
Strand 5	G	64	67	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	148	first strand
Strand 2	G	208	210	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	173	175	first strand
Strand 2	G	182	184	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	224	225	first strand
Strand 2	G	238	244	anti-parallel
Strand 3	G	228	229	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	224	225	first strand
Strand 2	G	238	244	anti-parallel
Strand 3	G	247	253	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	292	294	first strand
Strand 2	G	285	287	anti-parallel
Strand 3	G	608	611	anti-parallel
Strand 4	G	591	596	parallel
Strand 5	G	565	569	parallel
Strand 6	G	314	317	parallel
Strand 7	G	339	340	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	447	450	first strand
Strand 2	G	431	435	parallel
Strand 3	G	376	380	parallel
Strand 4	G	498	503	parallel
Strand 5	G	530	534	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	620	623	first strand
Strand 2	G	628	632	anti-parallel
Strand 3	G	785	786	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	704	705	first strand
Strand 2	G	736	737	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	870	871	first strand
Strand 2	G	860	863	anti-parallel
Strand 3	G	901	907	anti-parallel
Strand 4	G	812	817	anti-parallel
Strand 5	G	883	887	parallel
Strand 6	G	842	844	anti-parallel
Strand 7	G	873	875	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	48	50	first strand
Strand 2	I	114	116	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	75	81	first strand
Strand 2	I	87	95	anti-parallel
Strand 3	I	131	132	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	61	63	first strand
Strand 2	L	78	80	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	68	69	first strand
Strand 2	L	74	75	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	66	72	first strand
Strand 2	M	77	82	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	61	63	first strand
Strand 2	N	67	69	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	25	first strand
Strand 2	B	3	4	anti-parallel
Strand 3	B	194	195	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	60	first strand
Strand 2	B	95	99	parallel
Strand 3	B	122	126	parallel
Strand 4	B	153	155	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TAM

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TAM