Analysis of interatomic Contacts of Structural Units in PDB entry:
9TBF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TBF entry

There is 1 chain in PDB entry 9TBF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9TBF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 8Right-handed 310
Helix 2
AA2
A
11 28Right-handed alpha
Helix 3
AA3
A
28 39Right-handed alpha
Helix 4
AA4
A
44 47Right-handed 310
Helix 5
AA5
A
48 75Right-handed alpha
Helix 6
AA6
A
95 106Right-handed alpha
Helix 7
AA7
A
106 117Right-handed alpha
Helix 8
AA8
A
121 135Right-handed alpha
Helix 9
AA9
A
138 143Right-handed alpha
Helix 10
AB1
A
144 147Right-handed 310
Helix 11
AB2
A
148 154Right-handed alpha
Helix 12
AB3
A
160 183Right-handed alpha
Helix 13
AB4
A
197 210Right-handed alpha
Helix 14
AB5
A
213 220Right-handed alpha
Helix 15
AB6
A
220 225Right-handed alpha
Helix 16
AB7
A
227 237Right-handed alpha
Helix 17
AB8
A
247 261Right-handed alpha
Helix 18
AB9
A
266 271Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9TBF.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 79first strand
Strand 2
A
84 87anti-parallel
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