Analysis of interatomic Contacts of Structural Units in PDB entry:
9TCC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9TCC entry

There are 3 chains in PDB entry 9TCC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	GLU 1060
B	ALA 2	GLU 1060
C	ALA 2	GLU 1060

There are120 helices in PDB entry 9TCC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	22	Right-handed 310
Helix 2	AA2	A	46	49	Right-handed 310
Helix 3	AA3	A	63	70	Right-handed alpha
Helix 4	AA4	A	83	91	Right-handed alpha
Helix 5	AA5	A	129	133	Right-handed 310
Helix 6	AA6	A	143	166	Right-handed alpha
Helix 7	AA7	A	169	190	Right-handed alpha
Helix 8	AA8	A	202	211	Right-handed alpha
Helix 9	AA9	A	262	275	Right-handed alpha
Helix 10	AB1	A	277	291	Right-handed alpha
Helix 11	AB2	A	303	319	Right-handed alpha
Helix 12	AB3	A	330	343	Right-handed alpha
Helix 13	AB4	A	359	376	Right-handed alpha
Helix 14	AB5	A	383	404	Right-handed alpha
Helix 15	AB6	A	426	442	Right-handed alpha
Helix 16	AB7	A	456	467	Right-handed alpha
Helix 17	AB8	A	469	486	Right-handed alpha
Helix 18	AB9	A	497	510	Right-handed alpha
Helix 19	AC1	A	512	522	Right-handed alpha
Helix 20	AC2	A	574	586	Right-handed alpha
Helix 21	AC3	A	655	659	Right-handed alpha
Helix 22	AC4	A	682	686	Right-handed alpha
Helix 23	AC5	A	687	692	Right-handed 310
Helix 24	AC6	A	712	724	Right-handed alpha
Helix 25	AC7	A	734	756	Right-handed alpha
Helix 26	AC8	A	766	778	Right-handed alpha
Helix 27	AC9	A	786	800	Right-handed alpha
Helix 28	AD1	A	807	816	Right-handed alpha
Helix 29	AD2	A	816	827	Right-handed alpha
Helix 30	AD3	A	827	837	Right-handed alpha
Helix 31	AD4	A	838	854	Right-handed alpha
Helix 32	AD5	A	861	864	Right-handed 310
Helix 33	AD6	A	896	901	Right-handed 310
Helix 34	AD7	A	905	909	Right-handed 310
Helix 35	AD8	A	914	930	Right-handed alpha
Helix 36	AD9	A	938	942	Right-handed 310
Helix 37	AE1	A	944	954	Right-handed alpha
Helix 38	AE2	A	987	994	Right-handed alpha
Helix 39	AE3	A	994	999	Right-handed alpha
Helix 40	AE4	A	1048	1059	Right-handed alpha
Helix 41	AE5	B	17	22	Right-handed 310
Helix 42	AE6	B	46	49	Right-handed 310
Helix 43	AE7	B	63	70	Right-handed alpha
Helix 44	AE8	B	83	91	Right-handed alpha
Helix 45	AE9	B	129	133	Right-handed 310
Helix 46	AF1	B	143	166	Right-handed alpha
Helix 47	AF2	B	169	190	Right-handed alpha
Helix 48	AF3	B	202	211	Right-handed alpha
Helix 49	AF4	B	262	275	Right-handed alpha
Helix 50	AF5	B	277	291	Right-handed alpha
Helix 51	AF6	B	303	319	Right-handed alpha
Helix 52	AF7	B	330	343	Right-handed alpha
Helix 53	AF8	B	359	376	Right-handed alpha
Helix 54	AF9	B	383	404	Right-handed alpha
Helix 55	AG1	B	426	442	Right-handed alpha
Helix 56	AG2	B	456	467	Right-handed alpha
Helix 57	AG3	B	469	486	Right-handed alpha
Helix 58	AG4	B	497	510	Right-handed alpha
Helix 59	AG5	B	512	522	Right-handed alpha
Helix 60	AG6	B	574	586	Right-handed alpha
Helix 61	AG7	B	655	659	Right-handed alpha
Helix 62	AG8	B	682	686	Right-handed alpha
Helix 63	AG9	B	687	692	Right-handed 310
Helix 64	AH1	B	712	724	Right-handed alpha
Helix 65	AH2	B	734	756	Right-handed alpha
Helix 66	AH3	B	766	778	Right-handed alpha
Helix 67	AH4	B	786	800	Right-handed alpha
Helix 68	AH5	B	807	816	Right-handed alpha
Helix 69	AH6	B	816	827	Right-handed alpha
Helix 70	AH7	B	827	837	Right-handed alpha
Helix 71	AH8	B	838	854	Right-handed alpha
Helix 72	AH9	B	861	864	Right-handed 310
Helix 73	AI1	B	896	901	Right-handed 310
Helix 74	AI2	B	905	909	Right-handed 310
Helix 75	AI3	B	914	930	Right-handed alpha
Helix 76	AI4	B	938	942	Right-handed 310
Helix 77	AI5	B	944	954	Right-handed alpha
Helix 78	AI6	B	987	994	Right-handed alpha
Helix 79	AI7	B	994	999	Right-handed alpha
Helix 80	AI8	B	1048	1059	Right-handed alpha
Helix 81	AI9	C	17	22	Right-handed 310
Helix 82	AJ1	C	46	49	Right-handed 310
Helix 83	AJ2	C	63	70	Right-handed alpha
Helix 84	AJ3	C	83	91	Right-handed alpha
Helix 85	AJ4	C	129	133	Right-handed 310
Helix 86	AJ5	C	143	166	Right-handed alpha
Helix 87	AJ6	C	169	190	Right-handed alpha
Helix 88	AJ7	C	202	211	Right-handed alpha
Helix 89	AJ8	C	262	275	Right-handed alpha
Helix 90	AJ9	C	277	291	Right-handed alpha
Helix 91	AK1	C	303	319	Right-handed alpha
Helix 92	AK2	C	330	343	Right-handed alpha
Helix 93	AK3	C	359	376	Right-handed alpha
Helix 94	AK4	C	383	404	Right-handed alpha
Helix 95	AK5	C	426	442	Right-handed alpha
Helix 96	AK6	C	456	467	Right-handed alpha
Helix 97	AK7	C	469	486	Right-handed alpha
Helix 98	AK8	C	497	510	Right-handed alpha
Helix 99	AK9	C	512	522	Right-handed alpha
Helix 100	AL1	C	574	586	Right-handed alpha
Helix 101	AL2	C	655	659	Right-handed alpha
Helix 102	AL3	C	682	686	Right-handed alpha
Helix 103	AL4	C	687	692	Right-handed 310
Helix 104	AL5	C	712	724	Right-handed alpha
Helix 105	AL6	C	734	756	Right-handed alpha
Helix 106	AL7	C	766	778	Right-handed alpha
Helix 107	AL8	C	786	800	Right-handed alpha
Helix 108	AL9	C	807	816	Right-handed alpha
Helix 109	AM1	C	816	827	Right-handed alpha
Helix 110	AM2	C	827	837	Right-handed alpha
Helix 111	AM3	C	838	854	Right-handed alpha
Helix 112	AM4	C	861	864	Right-handed 310
Helix 113	AM5	C	896	901	Right-handed 310
Helix 114	AM6	C	905	909	Right-handed 310
Helix 115	AM7	C	914	930	Right-handed alpha
Helix 116	AM8	C	938	942	Right-handed 310
Helix 117	AM9	C	944	954	Right-handed alpha
Helix 118	AN1	C	987	994	Right-handed alpha
Helix 119	AN2	C	994	999	Right-handed alpha
Helix 120	AN3	C	1048	1059	Right-handed alpha

There are 33 sheets in PDB entry 9TCC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	108	first strand
Strand 2	A	113	116	anti-parallel
Strand 3	A	123	125	anti-parallel
Strand 4	A	25	27	anti-parallel
Strand 5	A	4	9	parallel
Strand 6	A	1033	1040	anti-parallel
Strand 7	A	1021	1028	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	38	first strand
Strand 2	A	41	44	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	78	80	first strand
Strand 2	A	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	137	first strand
Strand 2	A	961	968	anti-parallel
Strand 3	A	976	982	anti-parallel
Strand 4	A	1006	1010	parallel
Strand 5	A	1013	1017	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	680	681	first strand
Strand 2	A	215	219	anti-parallel
Strand 3	A	694	698	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	538	first strand
Strand 2	A	221	224	anti-parallel
Strand 3	A	549	558	anti-parallel
Strand 4	A	645	654	anti-parallel
Strand 5	A	636	637	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	230	first strand
Strand 2	A	244	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	411	413	first strand
Strand 2	A	416	418	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	615	619	first strand
Strand 2	A	625	628	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	660	662	first strand
Strand 2	A	670	672	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	866	872	first strand
Strand 2	A	877	883	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	108	first strand
Strand 2	B	113	116	anti-parallel
Strand 3	B	123	125	anti-parallel
Strand 4	B	25	27	anti-parallel
Strand 5	B	4	9	parallel
Strand 6	B	1033	1040	anti-parallel
Strand 7	B	1021	1028	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	38	first strand
Strand 2	B	41	44	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	80	first strand
Strand 2	B	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	137	first strand
Strand 2	B	961	968	anti-parallel
Strand 3	B	976	982	anti-parallel
Strand 4	B	1006	1010	parallel
Strand 5	B	1013	1017	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	680	681	first strand
Strand 2	B	215	219	anti-parallel
Strand 3	B	694	698	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	538	first strand
Strand 2	B	221	224	anti-parallel
Strand 3	B	549	558	anti-parallel
Strand 4	B	645	654	anti-parallel
Strand 5	B	636	637	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	228	230	first strand
Strand 2	B	244	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	413	first strand
Strand 2	B	416	418	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	615	619	first strand
Strand 2	B	625	628	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	660	662	first strand
Strand 2	B	670	672	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	866	872	first strand
Strand 2	B	877	883	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	108	first strand
Strand 2	C	113	116	anti-parallel
Strand 3	C	123	125	anti-parallel
Strand 4	C	25	27	anti-parallel
Strand 5	C	4	9	parallel
Strand 6	C	1033	1040	anti-parallel
Strand 7	C	1021	1028	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	38	first strand
Strand 2	C	41	44	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	80	first strand
Strand 2	C	101	103	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	137	first strand
Strand 2	C	961	968	anti-parallel
Strand 3	C	976	982	anti-parallel
Strand 4	C	1006	1010	parallel
Strand 5	C	1013	1017	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	680	681	first strand
Strand 2	C	215	219	anti-parallel
Strand 3	C	694	698	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	538	first strand
Strand 2	C	221	224	anti-parallel
Strand 3	C	549	558	anti-parallel
Strand 4	C	645	654	anti-parallel
Strand 5	C	636	637	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	228	230	first strand
Strand 2	C	244	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	411	413	first strand
Strand 2	C	416	418	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	615	619	first strand
Strand 2	C	625	628	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	660	662	first strand
Strand 2	C	670	672	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	866	872	first strand
Strand 2	C	877	883	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9TCC

Analysis of interatomic Contacts of Structural Units in PDB entry:
9TCC