Analysis of interatomic Contacts of Structural Units in PDB entry:
9TCL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9TCL entry

There are 2 chains in PDB entry 9TCL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 5ALA 371
A
 ALA 5ALA 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9TCL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
19 26Right-handed alpha
Helix 2
AA2
B
27 50Right-handed alpha
Helix 3
AA3
B
55 60Right-handed alpha
Helix 4
AA4
B
60 73Right-handed alpha
Helix 5
AA5
B
78 85Right-handed alpha
Helix 6
AA6
B
93 113Right-handed alpha
Helix 7
AA7
B
119 132Right-handed alpha
Helix 8
AA8
B
160 176Right-handed alpha
Helix 9
AA9
B
182 198Right-handed alpha
Helix 10
AB1
B
203 219Right-handed alpha
Helix 11
AB2
B
229 236Right-handed alpha
Helix 12
AB3
B
236 249Right-handed alpha
Helix 13
AB4
B
252 293Right-handed alpha
Helix 14
AB5
B
298 308Right-handed alpha
Helix 15
AB6
B
313 318Right-handed alpha
Helix 16
AB7
B
323 337Right-handed alpha
Helix 17
AB8
B
353 362Right-handed alpha
Helix 18
AB9
A
19 26Right-handed alpha
Helix 19
AC1
A
27 50Right-handed alpha
Helix 20
AC2
A
55 60Right-handed alpha
Helix 21
AC3
A
60 73Right-handed alpha
Helix 22
AC4
A
78 85Right-handed alpha
Helix 23
AC5
A
93 113Right-handed alpha
Helix 24
AC6
A
119 132Right-handed alpha
Helix 25
AC7
A
160 176Right-handed alpha
Helix 26
AC8
A
182 198Right-handed alpha
Helix 27
AC9
A
203 219Right-handed alpha
Helix 28
AD1
A
229 236Right-handed alpha
Helix 29
AD2
A
236 249Right-handed alpha
Helix 30
AD3
A
252 293Right-handed alpha
Helix 31
AD4
A
298 308Right-handed alpha
Helix 32
AD5
A
313 318Right-handed alpha
Helix 33
AD6
A
323 337Right-handed alpha
Helix 34
AD7
A
353 362Right-handed alpha
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There are 2 sheets in PDB entry 9TCL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 311first strand
Strand 2
B
349 352anti-parallel
Strand 3
B
341 344anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
349 352anti-parallel
Strand 3
A
341 344anti-parallel
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